fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G20700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038991 not found in 215aa AT4G35550.1 1st_not 0.406504065 II
Pt002505 not found in 248aa AT4G35550.1 not_not 0.403794037 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G20700.1     MVKKKKEKEKSKEIEEMDREIQNG--------AYSG-------RVMTEEQMEILRKQIAV
pt002505_POPTR_ -MDWDNNQENHQDSHQNQRECRNGINGTNVNVNGNGGTNMLYVKVMTDEQLETLRKQIAV
pt038991_POPTR_ -MEEGRFQ------------------------NGGG----LGVKVMTDEQMEMLRKQISV
                 :.  . :                          .*       :***:**:* *****:*

AT1G20700.1     YAVICDQLVLLHNSLSSYHPLSSGVRPMVGG-YFDPMGASSSSHRISTRHRWTPTSTQLQ
pt002505_POPTR_ YAAICEQLVEMHKTLSAQQDLAGG---RLGNLYCDPL-MASGGHKITARQRWTPTPVQLQ
pt038991_POPTR_ YATICEQLVEMHKALSAQQDFAGM---GLGNPYCDPL-LSSAVHKIGSRQRWTPKPAQLQ
                **.**:*** :*::**: : ::.     :*. * **:  :*. *:* :*:****...***

AT1G20700.1     ILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQ
pt002505_POPTR_ ILERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQLVASSNNAE
pt038991_POPTR_ ILEQIFEQCNATPGRQKIKDITRELAQHGQISETNVYNWFQNRRARSKRKQSAVVPNNGE
                *** *::: ..**.:::*::*: **::****:*******************  . . *.:

AT1G20700.1     AD---DVAVTTEERRSCGD--------SGGLESYEHILFPSPDL-------GIEHLLSIG
pt002505_POPTR_ SEVETEVDSLNEKK------KPEIFHAQQNPPRAEDLCFQSPEISSELHFLGDDHLT--G
pt038991_POPTR_ SEMETDIESLKEKKTRAEDSQPD----ENTTPMADHMYFNSPDI-------GFDQLM--G
                ::   ::   .*::             .      :.: * **::       * ::*   *

AT1G20700.1     KF-----------MET-----
pt002505_POPTR_ KMGVPGNYNLYDQAEDYGMAG
pt038991_POPTR_ KIESPGSCIPYWQMEQYDLFG
                *:            *
BoxShade v3.31 C (beta, 970507) Output
AT1G20700.1     M V K K K K E K E K S K E I E E M D R E I Q N G - - - - - - - - A Y S G - - - - - - - R V M T E E Q M E I L R K Q I A V
pt002505_POPTR_    - M D W D N N Q E N H Q D S H Q N Q R E C R N G I N G T N V N V N G N G G T N M L Y V K V M T D E Q L E T L R K Q I A V
pt038991_POPTR_    - M E E G R F Q - - - - - - - - - - - - - - - - - - - - - - - - N G G G - - - - L G V K V M T D E Q M E M L R K Q I S V
 
AT1G20700.1     Y A V I C D Q L V L L H N S L S S Y H P L S S G V R P M V G G - Y F D P M G A S S S S H R I S T R H R W T P T S T Q L Q
pt002505_POPTR_    Y A A I C E Q L V E M H K T L S A Q Q D L A G G - - - R L G N L Y C D P L - M A S G G H K I T A R Q R W T P T P V Q L Q
pt038991_POPTR_    Y A T I C E Q L V E M H K A L S A Q Q D F A G M - - - G L G N P Y C D P L - L S S A V H K I G S R Q R W T P K P A Q L Q
 
AT1G20700.1     I L E S I Y D E G S G T P N R R R I R E I A T E L S E H G Q I T E T N V Y N W F Q N R R A R S K R K Q P Q T T T A N G Q
pt002505_POPTR_    I L E R I F D Q G N G T P S K Q K I K E I T S E L S Q H G Q I S E T N V Y N W F Q N R R A R S K R K Q L V A S S N N A E
pt038991_POPTR_    I L E Q I F E Q C N A T P G R Q K I K D I T R E L A Q H G Q I S E T N V Y N W F Q N R R A R S K R K Q S A V V P N N G E
 
AT1G20700.1     A D - - - D V A V T T E E R R S C G D - - - - - - - - S G G L E S Y E H I L F P S P D L - - - - - - - G I E H L L S I G
pt002505_POPTR_    S E V E T E V D S L N E K K - - - - - - K P E I F H A Q Q N P P R A E D L C F Q S P E I S S E L H F L G D D H L T - - G
pt038991_POPTR_    S E M E T D I E S L K E K K T R A E D S Q P D - - - - E N T T P M A D H M Y F N S P D I - - - - - - - G F D Q L M - - G
 
AT1G20700.1     K F - - - - - - - - - - - M E T - - - - -
pt002505_POPTR_    K M G V P G N Y N L Y D Q A E D Y G M A G
pt038991_POPTR_    K I E S P G S C I P Y W Q M E Q Y D L F G
 
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