fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G20900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039215 not found in 302aa AT4G35390.1 not_not 0.445820433 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G20900.1     MEGGYE--QGGGASRYF---HNLFRPEIHHQQLQPQGGINLIDQHHHQHQQHQQQQQPSD
pt039215_POPTR_ -MAGYESTSTGNNSRYLHHNHNLLRPELHLIQ--------------------RPSTIPSS
                  .***  . *. ***:   ***:***:*  *                    : .  **.

AT1G20900.1     DSRES-----DH----SNKDHHQQGRPDSDPNTSSSA-----PGKRPRGRPPGSKNKAKP
pt039215_POPTR_ DSKENNTPSPDHAKPIATSDHH----PDRTTSGTSSGGGGTNPSSRPRGRPAGSKNKPKP
                **:*.     **    :..***    **  .. :**.     *..******.*****.**

AT1G20900.1     PIIVTRDSPNALRSHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTP
pt039215_POPTR_ PIIVTRDSPNALRSHVLEVSSGADIVESVSNYARKRGIGVCVLSGSGSVANVTLRQPASP
                ********************.*********.***:** **.**.*.*:*:*******.:*

AT1G20900.1     GNGGGVSGGGGVVTLHGRFEILSLTGTVLPPPAPPGAGGLSIFLAGGQGQVVGGSVVAPL
pt039215_POPTR_ --------AGSVLTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVGGNVVGLL
                        .*.*:***********:*******************:*********.**. *

AT1G20900.1     IASAPVILMAASFSNAVFERLPIEEEEEEGGGGGGGGGGGPPQMQQAPSASPPSGVTGQ-
pt039215_POPTR_ MAAGPVVLMAASFANAVFERLPLDDQEEAGA------------VQVQPTASQNSGVTGSG
                :*:.**:******:********::::** *.            :*  *:**  *****. 

AT1G20900.1     GQLGGNVGG------------------YGFSGDPHLLG-WGAGTPSRPPF
pt039215_POPTR_ GQMGDGGGGSSTGGGGFFPMGGAHHGTYPFSAD--LFGSWG-GNASRPPF
                **:*.. **                  * **.*  *:* ** *..*****
BoxShade v3.31 C (beta, 970507) Output
AT1G20900.1     M E G G Y E - - Q G G G A S R Y F - - - H N L F R P E I H H Q Q L Q P Q G G I N L I D Q H H H Q H Q Q H Q Q Q Q Q P S D
pt039215_POPTR_    - M A G Y E S T S T G N N S R Y L H H N H N L L R P E L H L I Q - - - - - - - - - - - - - - - - - - - - R P S T I P S S
 
AT1G20900.1     D S R E S - - - - - D H - - - - S N K D H H Q Q G R P D S D P N T S S S A - - - - - P G K R P R G R P P G S K N K A K P
pt039215_POPTR_    D S K E N N T P S P D H A K P I A T S D H H - - - - P D R T T S G T S S G G G G T N P S S R P R G R P A G S K N K P K P
 
AT1G20900.1     P I I V T R D S P N A L R S H V L E V S P G A D I V E S V S T Y A R R R G R G V S V L G G N G T V S N V T L R Q P V T P
pt039215_POPTR_    P I I V T R D S P N A L R S H V L E V S S G A D I V E S V S N Y A R K R G I G V C V L S G S G S V A N V T L R Q P A S P
 
AT1G20900.1     G N G G G V S G G G G V V T L H G R F E I L S L T G T V L P P P A P P G A G G L S I F L A G G Q G Q V V G G S V V A P L
pt039215_POPTR_    - - - - - - - - A G S V L T L H G R F E I L S L S G T V L P P P A P P G A G G L S I F L S G G Q G Q V V G G N V V G L L
 
AT1G20900.1     I A S A P V I L M A A S F S N A V F E R L P I E E E E E E G G G G G G G G G G G P P Q M Q Q A P S A S P P S G V T G Q -
pt039215_POPTR_    M A A G P V V L M A A S F A N A V F E R L P L D D Q E E A G A - - - - - - - - - - - - V Q V Q P T A S Q N S G V T G S G
 
AT1G20900.1     G Q L G G N V G G - - - - - - - - - - - - - - - - - - Y G F S G D P H L L G - W G A G T P S R P P F
pt039215_POPTR_    G Q M G D G G G G S S T G G G G F F P M G G A H H G T Y P F S A D - - L F G S W G - G N A S R P P F
 
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