fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G20900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000774 not found in 301aa AT1G20900.1 1st_1st 0.470588235 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G20900.1     MEGGYEQGGGASRYFH-----NLFRPEIHHQQLQPQGGINLIDQHHHQHQQHQQQQQPSD
pt000774_POPTR_ -MAGFE--GNNSRYVHGQNHNNLLRPELHLIQ--------------------RPSSIPSS
                  .*:*  *. ***.*     **:***:*  *                    : .. **.

AT1G20900.1     DSRES-------DHSNKDHHQQGRPDSDPNTSSSA---PGKRPRGRPPGSKNKAKPPIIV
pt000774_POPTR_ DSRDNNNTPSPPDHANQTAHHH--PDSSATTSSGGGTNPNRRPRGRPAGSKNKPKPPIIV
                ***:.       **:*:  *::  ***...***..   *.:******.*****.******

AT1G20900.1     TRDSPNALRSHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGG
pt000774_POPTR_ TRDSPNALRSHVIEISNGADIVESVSTYARKRGRGVCVLSGSGTVANVTLRQPASP----
                ************:*:* *************:*****.**.*.***:*******.:*    

AT1G20900.1     GVSGGGGVVTLHGRFEILSLTGTVLPPPAPPGAGGLSIFLAGGQGQVVGGSVVAPLIASA
pt000774_POPTR_ ----AGSVLTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVGGNVVGPLMAAG
                    .*.*:***********:*******************:*********.**.**:*:.

AT1G20900.1     PVILMAASFSNAVFERLPIEEEEEEGGGGGGGGGGGPPQMQQAPSASPPSGVTGQ-GQLG
pt000774_POPTR_ PVVLMAASFANAVFERLPLDDQEEAGA------------VQVQPTASQSSGVTGSGGQMG
                **:******:********::::** *.            :*  *:** .*****. **:*

AT1G20900.1     GNVGG---------------------YGFSGDPHLLG-WGAGTPSRPPF
pt000774_POPTR_ DGGGGSGTGGAGSGFFNMAGGAHHGNYPFSGD--LFGPWG-GSAARPPF
                .. **                     * ****  *:* ** *:.:****
BoxShade v3.31 C (beta, 970507) Output
AT1G20900.1     M E G G Y E Q G G G A S R Y F H - - - - - N L F R P E I H H Q Q L Q P Q G G I N L I D Q H H H Q H Q Q H Q Q Q Q Q P S D
pt000774_POPTR_    - M A G F E - - G N N S R Y V H G Q N H N N L L R P E L H L I Q - - - - - - - - - - - - - - - - - - - - R P S S I P S S
 
AT1G20900.1     D S R E S - - - - - - - D H S N K D H H Q Q G R P D S D P N T S S S A - - - P G K R P R G R P P G S K N K A K P P I I V
pt000774_POPTR_    D S R D N N N T P S P P D H A N Q T A H H H - - P D S S A T T S S G G G T N P N R R P R G R P A G S K N K P K P P I I V
 
AT1G20900.1     T R D S P N A L R S H V L E V S P G A D I V E S V S T Y A R R R G R G V S V L G G N G T V S N V T L R Q P V T P G N G G
pt000774_POPTR_    T R D S P N A L R S H V I E I S N G A D I V E S V S T Y A R K R G R G V C V L S G S G T V A N V T L R Q P A S P - - - -
 
AT1G20900.1     G V S G G G G V V T L H G R F E I L S L T G T V L P P P A P P G A G G L S I F L A G G Q G Q V V G G S V V A P L I A S A
pt000774_POPTR_    - - - - A G S V L T L H G R F E I L S L S G T V L P P P A P P G A G G L S I F L S G G Q G Q V V G G N V V G P L M A A G
 
AT1G20900.1     P V I L M A A S F S N A V F E R L P I E E E E E E G G G G G G G G G G G P P Q M Q Q A P S A S P P S G V T G Q - G Q L G
pt000774_POPTR_    P V V L M A A S F A N A V F E R L P L D D Q E E A G A - - - - - - - - - - - - V Q V Q P T A S Q S S G V T G S G G Q M G
 
AT1G20900.1     G N V G G - - - - - - - - - - - - - - - - - - - - - Y G F S G D P H L L G - W G A G T P S R P P F
pt000774_POPTR_    D G G G G S G T G G A G S G F F N M A G G A H H G N Y P F S G D - - L F G P W G - G S A A R P P F
 
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