fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G20900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000774 not found in 301aa AT1G20900.1 1st_1st 0.470588235 Ia
Pt039215 not found in 302aa AT4G35390.1 not_not 0.445820433 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G20900.1     MEGGYE--QGGGASRYFH-----NLFRPEIHHQQLQPQGGINLIDQHHHQHQQHQQQQQP
pt039215_POPTR_ -MAGYESTSTGNNSRYLH-HNH-NLLRPELHLIQ--------------------RPSTIP
pt000774_POPTR_ -MAGFE----GNNSRYVHGQNHNNLLRPELHLIQ--------------------RPSSIP
                  .*:*    *. ***.*     **:***:*  *                    : .  *

AT1G20900.1     SDDSRE-------SDHSN----KDHHQQGRPD-SDPNTSSSA----PGKRPRGRPPGSKN
pt039215_POPTR_ SSDSKE-NNTPS-PDHAKPIATSDHH----PDRTTSGTSSGGGGTNPSSRPRGRPAGSKN
pt000774_POPTR_ SSDSRDNNNTPSPPDHAN--QTAHHH----PD--SSATTSSGGGTNPNRRPRGRPAGSKN
                *.**::       .**::     .**    **   . *:*..    *. ******.****

AT1G20900.1     KAKPPIIVTRDSPNALRSHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQ
pt039215_POPTR_ KPKPPIIVTRDSPNALRSHVLEVSSGADIVESVSNYARKRGIGVCVLSGSGSVANVTLRQ
pt000774_POPTR_ KPKPPIIVTRDSPNALRSHVIEISNGADIVESVSTYARKRGRGVCVLSGSGTVANVTLRQ
                *.******************:*:* *********.***:** **.**.*.*:*:******

AT1G20900.1     PVTPGNGGGVSGGGGVVTLHGRFEILSLTGTVLPPPAPPGAGGLSIFLAGGQGQVVGGSV
pt039215_POPTR_ PASP--------AGSVLTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVGGNV
pt000774_POPTR_ PASP--------AGSVLTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVGGNV
                *.:*        .*.*:***********:*******************:*********.*

AT1G20900.1     VAPLIASAPVILMAASFSNAVFERLPIEEEEEEGGGGGGGGGGGPPQMQQAPSASPPSGV
pt039215_POPTR_ VGLLMAAGPVVLMAASFANAVFERLPLDDQEEAGA------------VQVQPTASQNSGV
pt000774_POPTR_ VGPLMAAGPVVLMAASFANAVFERLPLDDQEEAGA------------VQVQPTASQSSGV
                *. *:*:.**:******:********::::** *.            :*  *:**  ***

AT1G20900.1     TGQ-GQLGGNVGG---------------------YGFSGDPHLLG-WGAGTPSRPPF
pt039215_POPTR_ TGSGGQMGDGGGGSSTGGG--GFFPM-GGAHHGTYPFSAD--LFGSWG-GNASRPPF
pt000774_POPTR_ TGSGGQMGDGGGGSGTGGAGSGFFNMAGGAHHGNYPFSGD--LFGPWG-GSAARPPF
                **. **:*.. **                     * **.*  *:* ** *..:****
BoxShade v3.31 C (beta, 970507) Output
AT1G20900.1     M E G G Y E - - Q G G G A S R Y F H - - - - - N L F R P E I H H Q Q L Q P Q G G I N L I D Q H H H Q H Q Q H Q Q Q Q Q P
pt039215_POPTR_    - M A G Y E S T S T G N N S R Y L H - H N H - N L L R P E L H L I Q - - - - - - - - - - - - - - - - - - - - R P S T I P
pt000774_POPTR_    - M A G F E - - - - G N N S R Y V H G Q N H N N L L R P E L H L I Q - - - - - - - - - - - - - - - - - - - - R P S S I P
 
AT1G20900.1     S D D S R E - - - - - - - S D H S N - - - - K D H H Q Q G R P D - S D P N T S S S A - - - - P G K R P R G R P P G S K N
pt039215_POPTR_    S S D S K E - N N T P S - P D H A K P I A T S D H H - - - - P D R T T S G T S S G G G G T N P S S R P R G R P A G S K N
pt000774_POPTR_    S S D S R D N N N T P S P P D H A N - - Q T A H H H - - - - P D - - S S A T T S S G G G T N P N R R P R G R P A G S K N
 
AT1G20900.1     K A K P P I I V T R D S P N A L R S H V L E V S P G A D I V E S V S T Y A R R R G R G V S V L G G N G T V S N V T L R Q
pt039215_POPTR_    K P K P P I I V T R D S P N A L R S H V L E V S S G A D I V E S V S N Y A R K R G I G V C V L S G S G S V A N V T L R Q
pt000774_POPTR_    K P K P P I I V T R D S P N A L R S H V I E I S N G A D I V E S V S T Y A R K R G R G V C V L S G S G T V A N V T L R Q
 
AT1G20900.1     P V T P G N G G G V S G G G G V V T L H G R F E I L S L T G T V L P P P A P P G A G G L S I F L A G G Q G Q V V G G S V
pt039215_POPTR_    P A S P - - - - - - - - A G S V L T L H G R F E I L S L S G T V L P P P A P P G A G G L S I F L S G G Q G Q V V G G N V
pt000774_POPTR_    P A S P - - - - - - - - A G S V L T L H G R F E I L S L S G T V L P P P A P P G A G G L S I F L S G G Q G Q V V G G N V
 
AT1G20900.1     V A P L I A S A P V I L M A A S F S N A V F E R L P I E E E E E E G G G G G G G G G G G P P Q M Q Q A P S A S P P S G V
pt039215_POPTR_    V G L L M A A G P V V L M A A S F A N A V F E R L P L D D Q E E A G A - - - - - - - - - - - - V Q V Q P T A S Q N S G V
pt000774_POPTR_    V G P L M A A G P V V L M A A S F A N A V F E R L P L D D Q E E A G A - - - - - - - - - - - - V Q V Q P T A S Q S S G V
 
AT1G20900.1     T G Q - G Q L G G N V G G - - - - - - - - - - - - - - - - - - - - - Y G F S G D P H L L G - W G A G T P S R P P F
pt039215_POPTR_    T G S G G Q M G D G G G G S S T G G G - - G F F P M - G G A H H G T Y P F S A D - - L F G S W G - G N A S R P P F
pt000774_POPTR_    T G S G G Q M G D G G G G S G T G G A G S G F F N M A G G A H H G N Y P F S G D - - L F G P W G - G S A A R P P F
 
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