Input
| Putative repression domain
|
|
AT1G20900.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt000774 |
not found in 301aa |
AT1G20900.1 |
1st_1st |
0.470588235 |
Ia |
Pt039215 |
not found in 302aa |
AT4G35390.1 |
not_not |
0.445820433 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G20900.1 MEGGYE--QGGGASRYFH-----NLFRPEIHHQQLQPQGGINLIDQHHHQHQQHQQQQQP
pt000774_POPTR_ -MAGFE----GNNSRYVHGQNHNNLLRPELHLIQ--------------------RPSSIP
pt039215_POPTR_ -MAGYESTSTGNNSRYLH-HNH-NLLRPELHLIQ--------------------RPSTIP
.*:* *. ***.* **:***:* * : . *
AT1G20900.1 SDDSRE-------SDHSN----KDHHQQGRPD-SDPNTSSSA----PGKRPRGRPPGSKN
pt000774_POPTR_ SSDSRDNNNTPSPPDHAN--QTAHHH----PD--SSATTSSGGGTNPNRRPRGRPAGSKN
pt039215_POPTR_ SSDSKE-NNTPS-PDHAKPIATSDHH----PDRTTSGTSSGGGGTNPSSRPRGRPAGSKN
*.**:: .**:: .** ** . *:*.. *. ******.****
AT1G20900.1 KAKPPIIVTRDSPNALRSHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQ
pt000774_POPTR_ KPKPPIIVTRDSPNALRSHVIEISNGADIVESVSTYARKRGRGVCVLSGSGTVANVTLRQ
pt039215_POPTR_ KPKPPIIVTRDSPNALRSHVLEVSSGADIVESVSNYARKRGIGVCVLSGSGSVANVTLRQ
*.******************:*:* *********.***:** **.**.*.*:*:******
AT1G20900.1 PVTPGNGGGVSGGGGVVTLHGRFEILSLTGTVLPPPAPPGAGGLSIFLAGGQGQVVGGSV
pt000774_POPTR_ PASP--------AGSVLTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVGGNV
pt039215_POPTR_ PASP--------AGSVLTLHGRFEILSLSGTVLPPPAPPGAGGLSIFLSGGQGQVVGGNV
*.:* .*.*:***********:*******************:*********.*
AT1G20900.1 VAPLIASAPVILMAASFSNAVFERLPIEEEEEEGGGGGGGGGGGPPQMQQAPSASPPSGV
pt000774_POPTR_ VGPLMAAGPVVLMAASFANAVFERLPLDDQEEAGA------------VQVQPTASQSSGV
pt039215_POPTR_ VGLLMAAGPVVLMAASFANAVFERLPLDDQEEAGA------------VQVQPTASQNSGV
*. *:*:.**:******:********::::** *. :* *:** ***
AT1G20900.1 TGQ-GQLGGNVGG---------------------YGFSGDPHLLG-WGAGTPSRPPF
pt000774_POPTR_ TGSGGQMGDGGGGSGTGGAGSGFFNMAGGAHHGNYPFSGD--LFGPWG-GSAARPPF
pt039215_POPTR_ TGSGGQMGDGGGGSSTGGG--GFFPM-GGAHHGTYPFSAD--LFGSWG-GNASRPPF
**. **:*.. ** * **.* *:* ** *..:****
BoxShade v3.31 C (beta, 970507) Output
AT1G20900.1 |
M |
E |
G |
G |
Y |
E |
- |
- |
Q |
G |
G |
G |
A |
S |
R |
Y |
F |
H |
- |
- |
- |
- |
- |
N |
L |
F |
R |
P |
E |
I |
H |
H |
Q |
Q |
L |
Q |
P |
Q |
G |
G |
I |
N |
L |
I |
D |
Q |
H |
H |
H |
Q |
H |
Q |
Q |
H |
Q |
Q |
Q |
Q |
Q |
P |
pt000774_POPTR_ |
- |
M |
A |
G |
F |
E |
- |
- |
- |
- |
G |
N |
N |
S |
R |
Y |
V |
H |
G |
Q |
N |
H |
N |
N |
L |
L |
R |
P |
E |
L |
H |
L |
I |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
P |
S |
S |
I |
P |
pt039215_POPTR_ |
- |
M |
A |
G |
Y |
E |
S |
T |
S |
T |
G |
N |
N |
S |
R |
Y |
L |
H |
- |
H |
N |
H |
- |
N |
L |
L |
R |
P |
E |
L |
H |
L |
I |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
P |
S |
T |
I |
P |
|
AT1G20900.1 |
S |
D |
D |
S |
R |
E |
- |
- |
- |
- |
- |
- |
- |
S |
D |
H |
S |
N |
- |
- |
- |
- |
K |
D |
H |
H |
Q |
Q |
G |
R |
P |
D |
- |
S |
D |
P |
N |
T |
S |
S |
S |
A |
- |
- |
- |
- |
P |
G |
K |
R |
P |
R |
G |
R |
P |
P |
G |
S |
K |
N |
pt000774_POPTR_ |
S |
S |
D |
S |
R |
D |
N |
N |
N |
T |
P |
S |
P |
P |
D |
H |
A |
N |
- |
- |
Q |
T |
A |
H |
H |
H |
- |
- |
- |
- |
P |
D |
- |
- |
S |
S |
A |
T |
T |
S |
S |
G |
G |
G |
T |
N |
P |
N |
R |
R |
P |
R |
G |
R |
P |
A |
G |
S |
K |
N |
pt039215_POPTR_ |
S |
S |
D |
S |
K |
E |
- |
N |
N |
T |
P |
S |
- |
P |
D |
H |
A |
K |
P |
I |
A |
T |
S |
D |
H |
H |
- |
- |
- |
- |
P |
D |
R |
T |
T |
S |
G |
T |
S |
S |
G |
G |
G |
G |
T |
N |
P |
S |
S |
R |
P |
R |
G |
R |
P |
A |
G |
S |
K |
N |
|
AT1G20900.1 |
K |
A |
K |
P |
P |
I |
I |
V |
T |
R |
D |
S |
P |
N |
A |
L |
R |
S |
H |
V |
L |
E |
V |
S |
P |
G |
A |
D |
I |
V |
E |
S |
V |
S |
T |
Y |
A |
R |
R |
R |
G |
R |
G |
V |
S |
V |
L |
G |
G |
N |
G |
T |
V |
S |
N |
V |
T |
L |
R |
Q |
pt000774_POPTR_ |
K |
P |
K |
P |
P |
I |
I |
V |
T |
R |
D |
S |
P |
N |
A |
L |
R |
S |
H |
V |
I |
E |
I |
S |
N |
G |
A |
D |
I |
V |
E |
S |
V |
S |
T |
Y |
A |
R |
K |
R |
G |
R |
G |
V |
C |
V |
L |
S |
G |
S |
G |
T |
V |
A |
N |
V |
T |
L |
R |
Q |
pt039215_POPTR_ |
K |
P |
K |
P |
P |
I |
I |
V |
T |
R |
D |
S |
P |
N |
A |
L |
R |
S |
H |
V |
L |
E |
V |
S |
S |
G |
A |
D |
I |
V |
E |
S |
V |
S |
N |
Y |
A |
R |
K |
R |
G |
I |
G |
V |
C |
V |
L |
S |
G |
S |
G |
S |
V |
A |
N |
V |
T |
L |
R |
Q |
|
AT1G20900.1 |
P |
V |
T |
P |
G |
N |
G |
G |
G |
V |
S |
G |
G |
G |
G |
V |
V |
T |
L |
H |
G |
R |
F |
E |
I |
L |
S |
L |
T |
G |
T |
V |
L |
P |
P |
P |
A |
P |
P |
G |
A |
G |
G |
L |
S |
I |
F |
L |
A |
G |
G |
Q |
G |
Q |
V |
V |
G |
G |
S |
V |
pt000774_POPTR_ |
P |
A |
S |
P |
- |
- |
- |
- |
- |
- |
- |
- |
A |
G |
S |
V |
L |
T |
L |
H |
G |
R |
F |
E |
I |
L |
S |
L |
S |
G |
T |
V |
L |
P |
P |
P |
A |
P |
P |
G |
A |
G |
G |
L |
S |
I |
F |
L |
S |
G |
G |
Q |
G |
Q |
V |
V |
G |
G |
N |
V |
pt039215_POPTR_ |
P |
A |
S |
P |
- |
- |
- |
- |
- |
- |
- |
- |
A |
G |
S |
V |
L |
T |
L |
H |
G |
R |
F |
E |
I |
L |
S |
L |
S |
G |
T |
V |
L |
P |
P |
P |
A |
P |
P |
G |
A |
G |
G |
L |
S |
I |
F |
L |
S |
G |
G |
Q |
G |
Q |
V |
V |
G |
G |
N |
V |
|
AT1G20900.1 |
V |
A |
P |
L |
I |
A |
S |
A |
P |
V |
I |
L |
M |
A |
A |
S |
F |
S |
N |
A |
V |
F |
E |
R |
L |
P |
I |
E |
E |
E |
E |
E |
E |
G |
G |
G |
G |
G |
G |
G |
G |
G |
G |
G |
P |
P |
Q |
M |
Q |
Q |
A |
P |
S |
A |
S |
P |
P |
S |
G |
V |
pt000774_POPTR_ |
V |
G |
P |
L |
M |
A |
A |
G |
P |
V |
V |
L |
M |
A |
A |
S |
F |
A |
N |
A |
V |
F |
E |
R |
L |
P |
L |
D |
D |
Q |
E |
E |
A |
G |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
V |
Q |
V |
Q |
P |
T |
A |
S |
Q |
S |
S |
G |
V |
pt039215_POPTR_ |
V |
G |
L |
L |
M |
A |
A |
G |
P |
V |
V |
L |
M |
A |
A |
S |
F |
A |
N |
A |
V |
F |
E |
R |
L |
P |
L |
D |
D |
Q |
E |
E |
A |
G |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
V |
Q |
V |
Q |
P |
T |
A |
S |
Q |
N |
S |
G |
V |
|
AT1G20900.1 |
T |
G |
Q |
- |
G |
Q |
L |
G |
G |
N |
V |
G |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
Y |
G |
F |
S |
G |
D |
P |
H |
L |
L |
G |
- |
W |
G |
A |
G |
T |
P |
S |
R |
P |
P |
F |
pt000774_POPTR_ |
T |
G |
S |
G |
G |
Q |
M |
G |
D |
G |
G |
G |
G |
S |
G |
T |
G |
G |
A |
G |
S |
G |
F |
F |
N |
M |
A |
G |
G |
A |
H |
H |
G |
N |
Y |
P |
F |
S |
G |
D |
- |
- |
L |
F |
G |
P |
W |
G |
- |
G |
S |
A |
A |
R |
P |
P |
F |
pt039215_POPTR_ |
T |
G |
S |
G |
G |
Q |
M |
G |
D |
G |
G |
G |
G |
S |
S |
T |
G |
G |
G |
- |
- |
G |
F |
F |
P |
M |
- |
G |
G |
A |
H |
H |
G |
T |
Y |
P |
F |
S |
A |
D |
- |
- |
L |
F |
G |
S |
W |
G |
- |
G |
N |
A |
S |
R |
P |
P |
F |
|
|