fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G20980.1 SGEERGLDLNLGSGLT at 79/1035 in AT1G20980.1
QDTRSSLSLQLFTSSP at 386/1035 in AT1G20980.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053471 not found in 1009aa AT1G20980.1 1st_1st 0.443793287 Ia
Pt038233 SVDDDGLGLNLGGSLT in 71/1044 AT1G20980.1 1st_1st 0.530633990 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G20980.1     MDEVGAQVAAPMFIHQ----------SLGRKRDLYYPMSNRLVQS----QPQRRDEWNSK
gm053471_Glyma2 MDQVA---PPPILMHR--------------KRDLSYAV----------VSPAPNPSWS--
pt038233_POPTR_ MEEVGAQVAAPIFIHEALSSRYCDMTSMAKKHDLSYQSPNSQLQQHQFLQASREKNWNSK
                *::*.   ..*:::*.              *:** *             ..  . .*.  

AT1G20980.1     MWDWDSRRFEAK-------PVDVEVQEFDLTLRNRSGEERGLDLNLGSGLTAVEETTTTT
gm053471_Glyma2 -WDWDSVRFAGKPPPPLSSPNDDVVFEESV--------APPLQLNLGGR----------T
pt038233_POPTR_ AWDWDS--------------VD----------------DDGLGLNLGGSLTSVEEPVS--
                 *****               *                   * ****.            

AT1G20980.1     QNVRPNKKVRSGSPG-GNYPMCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQ
gm053471_Glyma2 NNSNSNKRVRSGSPGTSSYPMCQVDNCREDLSKAKDYHRRHKVCEAHSKASKALLANQMQ
pt038233_POPTR_ ---RPNKRVRSGSPGNGSYPMCQVDNCKEDLSKAKDYHRRHKVCQVHSKATKALVGKQMQ
                   ..**:******* ..********* ****:***********:.****:***:.:***

AT1G20980.1     RFCQQCSRFHLLSEFDEGKRSCRRRLAGHNRRRRKTTQPEEVASGVVVPGNHDTTNNTAN
gm053471_Glyma2 RFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRK-TQPEDVTSATPAPA--------AA
pt038233_POPTR_ RFCQQCSRFHPLTEFDEGKRSCRRRLAGHNRRRRK-TQPEDVTSRLLLPGNPDMNN---N
                ********** *:********************** ****:*:*    *.          

AT1G20980.1     ANMDLMALLTALA-CAQGKNAVK------PP---VGSPAVPDREQLLQILNKINALPLPM
gm053471_Glyma2 ANLEIFDLLTAIAGASQGKFEEK-------------RSQVPVREQLVQILNRI---PLPA
pt038233_POPTR_ GNLDIVNLLTALA-RSQGKTYLPMIDFYVPPFVLTNCPTVPDKDQLIQILNKINSLPLPM
                .*:::. ****:*  :***                  . ** ::**:****:*   *** 

AT1G20980.1     DLVSKLNNIGSLARKNMDHPTVNPQ-----------NDMNG--ASPSTMDLLAVLSTTL-
gm053471_Glyma2 DLATKLLDAGSGNV-NGKKDQVQLQTPSSYQRHESHDQLNHTPAAPLTMDLLAVLSTTLS
pt038233_POPTR_ DLAAKLSNIASLNVKNPNQPYLGHQ-----------NRLNGTASSPSTNDLLAVLSTTL-
                **.:** : .*    * .:  :  *           : :*   ::* * ********** 

AT1G20980.1     GSSSPDALAILSQGGFGNKDSEKTKLSSYENGVTTNLEKRT-FGFSSVGGERSSSSNQSP
gm053471_Glyma2 GGSAPDASASPSQNHSCNSDGGSAD------------QTRQ-QQFFSVGGERSSSSSRSP
pt038233_POPTR_ AASAPDALAILSQRSSQSSDNDKSKLPGPNQVTVPHLQKRSNVEFPAVGVERISRCYESP
                ..*:*** *  **    ..*. .:.            :.*    * :** ** * . .**

AT1G20980.1     SQDSDSRGQDTRSSLSLQLFTSSPEDESRPTVASSRKYYSSASSNPVEDRSPSSS-PVMQ
gm053471_Glyma2 VEDSDCQ-EDVRVNLPLQLFSSSPEDDSLPKLASSRKYFSSDSSNPAEERSPSSS-PVVE
pt038233_POPTR_ AEDSDYQIQESRPNLPLQLFSSSPENESRQKPASSGKYFSSDSSNPIEERSPSSSPPVVQ
                 :*** : :: * .*.****:****::*  . *** **:** **** *:****** **::

AT1G20980.1     ELFPLQASPETMRSKNHKNSSPRT-----------GC-LPLELFGAS-NRGAADPNFKGF
gm053471_Glyma2 MLFDLQGGARGLKPE--SISSGREVIANKEASQSHSSNISLDLFKGSNNRIQQPSSLQSV
pt038233_POPTR_ KLFPLQSTAETMKSE--KMSVSREVNANVEGDRSHGCVLPLELFRGP-NREPDHSSFQSF
                 ** **. .. ::.:  . *  *            .. :.*:** .. **    ..::..

AT1G20980.1     GQQSGY-ASSGSDYSPPSLNSDAQDRTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSE
gm053471_Glyma2 PFQAGY-TSSGSDHSPPSLNSDAQDRTGRIMFKLFDKHPSHFPGTLRAQIYNWLSNRPSD
pt038233_POPTR_ PYRGGYTSSSGSDHSPSSQNSDPQDRTGRIIFKLFDKDPSHFPGTLRTKIYNWLSNSPSE
                  :.** :*****:**.* ***.*****:*:***:**.**::*****::******* **:

AT1G20980.1     MESYIRPGCVVLSVYVAMSPAAWEQLEQKLLQRLGVLLQNSPSDFWRNARFIVNTGRQLA
gm053471_Glyma2 MESYIRPGCVVLSIYASMSSADWEKLEENFLQHVHSLIQNSDSDFWRNGRFLVHSGSQFV
pt038233_POPTR_ MESYIRPGCVVLSVYLSMPSASWEQLERNLLQLVDSLVQDSDSDLWRSGRFLLNTGRQLA
                *************:* :*..* **:**.::** :  *:*:* **:**..**::::* *:.

AT1G20980.1     SHKNGKVRCSKSWRTWNSPELISVSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYM
gm053471_Glyma2 SHKDGKIRICKPWRTWKSPELISVSPLAIVSGHETSISLKGRNLSTPGTKIHCTGTGSYA
pt038233_POPTR_ SHKDGKVRLCKSWRTWSSPELILVSPVAVIGGQETSLQLKGRNLTGPGTKIHCTYMGGYT
                ***:**:* .*.****.***** ***:*::.*.***: ::**.*:  * .*:**  *.* 

AT1G20980.1     AMEVTRAVCRQTIFDELNVNSFKVQNVHPGFLGRCFIEVENGFRGDSFPLIIANASICKE
gm053471_Glyma2 SAEVIGSAYSGVMYDKIKLSAFKVQDVSHGVLGRCFIEVENGFKGNSFPVIIADETICKE
pt038233_POPTR_ SKEVTDSSSPGSMYDEINVGGFKIHGPSPSILGRCFIEVENGFKGNSFPVIIADASICKE
                : **  :     ::*::::..**::.   ..************:*:***:***: :****

AT1G20980.1     LNRLGEEFHPK---SQDMTEEQAQSSNRGPTSREEVLCFLNELGWLFQKNQTSELREQSD
gm053471_Glyma2 LRPLESEFDEEEKICDAISEEHEHHFGR-PRSREEALHFLNELGWLFQRERFSYVHEVPY
pt038233_POPTR_ LRLLESEFDENAVVSNIVSEEQTRDLGR-PRSREEVMHFLNELGWLFQRKSMPSMHEAPD
                *. * .**. :   .: ::**: :  .* * ****.: **********::  . ::* . 

AT1G20980.1     FSLARFKFLLVCSVERDYCALIRTLLDMLVERNLVNDELNREALDMLAEIQLLNRAVKRK
gm053471_Glyma2 YSLDRFKFVLTFAVERNCCMLVKTLLDVLVGKHLQGEWLSTGSVEMLNAIQLLNRAVKGK
pt038233_POPTR_ YSLNRFKFLLIFSVERDYCVLVKTILDMLVERNTCRDELSKEHLEMLYEIQLLNRSVKRR
                :** ****:*  :***: * *::*:**:** ::   : *.   ::**  ******:** :

AT1G20980.1     STKMVELLIHYLV----NPLTLSSSRKFVFLPNITGPGGITPLHLAACTSGSDDMIDLLT
gm053471_Glyma2 YVGMVDLLIHYSI-PSKN----GTSRKYVFPPNLEGPGGITPLHLAAGTSGSESVVDSLT
pt038233_POPTR_ CRKMADLLIHYSIIGGDN-----SSRTYIFPPNVGGPGGITPLHLAACASGSDGLVDALT
                   *.:***** :    *     :**.::* **: ************ :***:.::* **

AT1G20980.1     NDPQEIGLSSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNKQVSLNIEHEVVD
gm053471_Glyma2 SDPQEIGLKCWESLVDANGQTPHAYAMMRNNDSYNALVAHKLADRRRGEISVTIENA-IE
pt038233_POPTR_ NDPHEIGLSCWNSVLDANGLSPYAYAVMTKNHSYNLLVARKLADKRNGQISVAIGNE-IE
                .**:****..*::: **.* :*::** : :*..** ***:****:*. ::*: * :  ::

AT1G20980.1     QTGLSKR---LSLE-----MNKSSSSCASCATVALKYQRRVSGSQRLFPTPIIHSMLAVA
gm053471_Glyma2 QQSLRVE---LK-EKQSNLVKRGQSSCAKCANAEFRFNRRVPGSHGLLHRPFIYSMLAVA
pt038233_POPTR_ QAALEQEHVTIS-Q-----FQRERKSCAKCASVAAKMHGRFLGSQGLLQRPYVHSMLAIA
                * .*  .   :. :     .::  .***.**..  : : *. **: *:  * ::****:*

AT1G20980.1     TVCVCVCVFMHAFPIVRQGSHFSWGGLDYGSI
gm053471_Glyma2 AVCVCVCVFFRGRPFVGSVAPFSWENLDYGTM
pt038233_POPTR_ AVCVCVCLFFRGAPDIGLVAPFKWENLNYGTI
                :******:*::. * :   : *.* .*:**::
BoxShade v3.31 C (beta, 970507) Output
AT1G20980.1     M D E V G A Q V A A P M F I H Q - - - - - - - - - - S L G R K R D L Y Y P M S N R L V Q S - - - - Q P Q R R D E W N S K
gm053471_Glyma2    M D Q V A - - - P P P I L M H R - - - - - - - - - - - - - - K R D L S Y A V - - - - - - - - - - V S P A P N P S W S - -
pt038233_POPTR_    M E E V G A Q V A A P I F I H E A L S S R Y C D M T S M A K K H D L S Y Q S P N S Q L Q Q H Q F L Q A S R E K N W N S K
 
AT1G20980.1     M W D W D S R R F E A K - - - - - - - P V D V E V Q E F D L T L R N R S G E E R G L D L N L G S G L T A V E E T T T T T
gm053471_Glyma2    - W D W D S V R F A G K P P P P L S S P N D D V V F E E S V - - - - - - - - A P P L Q L N L G G R - - - - - - - - - - T
pt038233_POPTR_    A W D W D S - - - - - - - - - - - - - - V D - - - - - - - - - - - - - - - - D D G L G L N L G G S L T S V E E P V S - -
 
AT1G20980.1     Q N V R P N K K V R S G S P G - G N Y P M C Q V D N C T E D L S H A K D Y H R R H K V C E V H S K A T K A L V G K Q M Q
gm053471_Glyma2    N N S N S N K R V R S G S P G T S S Y P M C Q V D N C R E D L S K A K D Y H R R H K V C E A H S K A S K A L L A N Q M Q
pt038233_POPTR_    - - - R P N K R V R S G S P G N G S Y P M C Q V D N C K E D L S K A K D Y H R R H K V C Q V H S K A T K A L V G K Q M Q
 
AT1G20980.1     R F C Q Q C S R F H L L S E F D E G K R S C R R R L A G H N R R R R K T T Q P E E V A S G V V V P G N H D T T N N T A N
gm053471_Glyma2    R F C Q Q C S R F H P L S E F D E G K R S C R R R L A G H N R R R R K - T Q P E D V T S A T P A P A - - - - - - - - A A
pt038233_POPTR_    R F C Q Q C S R F H P L T E F D E G K R S C R R R L A G H N R R R R K - T Q P E D V T S R L L L P G N P D M N N - - - N
 
AT1G20980.1     A N M D L M A L L T A L A - C A Q G K N A V K - - - - - - P P - - - V G S P A V P D R E Q L L Q I L N K I N A L P L P M
gm053471_Glyma2    A N L E I F D L L T A I A G A S Q G K F E E K - - - - - - - - - - - - - R S Q V P V R E Q L V Q I L N R I - - - P L P A
pt038233_POPTR_    G N L D I V N L L T A L A - R S Q G K T Y L P M I D F Y V P P F V L T N C P T V P D K D Q L I Q I L N K I N S L P L P M
 
AT1G20980.1     D L V S K L N N I G S L A R K N M D H P T V N P Q - - - - - - - - - - - N D M N G - - A S P S T M D L L A V L S T T L -
gm053471_Glyma2    D L A T K L L D A G S G N V - N G K K D Q V Q L Q T P S S Y Q R H E S H D Q L N H T P A A P L T M D L L A V L S T T L S
pt038233_POPTR_    D L A A K L S N I A S L N V K N P N Q P Y L G H Q - - - - - - - - - - - N R L N G T A S S P S T N D L L A V L S T T L -
 
AT1G20980.1     G S S S P D A L A I L S Q G G F G N K D S E K T K L S S Y E N G V T T N L E K R T - F G F S S V G G E R S S S S N Q S P
gm053471_Glyma2    G G S A P D A S A S P S Q N H S C N S D G G S A D - - - - - - - - - - - - Q T R Q - Q Q F F S V G G E R S S S S S R S P
pt038233_POPTR_    A A S A P D A L A I L S Q R S S Q S S D N D K S K L P G P N Q V T V P H L Q K R S N V E F P A V G V E R I S R C Y E S P
 
AT1G20980.1     S Q D S D S R G Q D T R S S L S L Q L F T S S P E D E S R P T V A S S R K Y Y S S A S S N P V E D R S P S S S - P V M Q
gm053471_Glyma2    V E D S D C Q - E D V R V N L P L Q L F S S S P E D D S L P K L A S S R K Y F S S D S S N P A E E R S P S S S - P V V E
pt038233_POPTR_    A E D S D Y Q I Q E S R P N L P L Q L F S S S P E N E S R Q K P A S S G K Y F S S D S S N P I E E R S P S S S P P V V Q
 
AT1G20980.1     E L F P L Q A S P E T M R S K N H K N S S P R T - - - - - - - - - - - G C - L P L E L F G A S - N R G A A D P N F K G F
gm053471_Glyma2    M L F D L Q G G A R G L K P E - - S I S S G R E V I A N K E A S Q S H S S N I S L D L F K G S N N R I Q Q P S S L Q S V
pt038233_POPTR_    K L F P L Q S T A E T M K S E - - K M S V S R E V N A N V E G D R S H G C V L P L E L F R G P - N R E P D H S S F Q S F
 
AT1G20980.1     G Q Q S G Y - A S S G S D Y S P P S L N S D A Q D R T G K I V F K L L D K D P S Q L P G T L R S E I Y N W L S N I P S E
gm053471_Glyma2    P F Q A G Y - T S S G S D H S P P S L N S D A Q D R T G R I M F K L F D K H P S H F P G T L R A Q I Y N W L S N R P S D
pt038233_POPTR_    P Y R G G Y T S S S G S D H S P S S Q N S D P Q D R T G R I I F K L F D K D P S H F P G T L R T K I Y N W L S N S P S E
 
AT1G20980.1     M E S Y I R P G C V V L S V Y V A M S P A A W E Q L E Q K L L Q R L G V L L Q N S P S D F W R N A R F I V N T G R Q L A
gm053471_Glyma2    M E S Y I R P G C V V L S I Y A S M S S A D W E K L E E N F L Q H V H S L I Q N S D S D F W R N G R F L V H S G S Q F V
pt038233_POPTR_    M E S Y I R P G C V V L S V Y L S M P S A S W E Q L E R N L L Q L V D S L V Q D S D S D L W R S G R F L L N T G R Q L A
 
AT1G20980.1     S H K N G K V R C S K S W R T W N S P E L I S V S P V A V V A G E E T S L V V R G R S L T N D G I S I R C T H M G S Y M
gm053471_Glyma2    S H K D G K I R I C K P W R T W K S P E L I S V S P L A I V S G H E T S I S L K G R N L S T P G T K I H C T G T G S Y A
pt038233_POPTR_    S H K D G K V R L C K S W R T W S S P E L I L V S P V A V I G G Q E T S L Q L K G R N L T G P G T K I H C T Y M G G Y T
 
AT1G20980.1     A M E V T R A V C R Q T I F D E L N V N S F K V Q N V H P G F L G R C F I E V E N G F R G D S F P L I I A N A S I C K E
gm053471_Glyma2    S A E V I G S A Y S G V M Y D K I K L S A F K V Q D V S H G V L G R C F I E V E N G F K G N S F P V I I A D E T I C K E
pt038233_POPTR_    S K E V T D S S S P G S M Y D E I N V G G F K I H G P S P S I L G R C F I E V E N G F K G N S F P V I I A D A S I C K E
 
AT1G20980.1     L N R L G E E F H P K - - - S Q D M T E E Q A Q S S N R G P T S R E E V L C F L N E L G W L F Q K N Q T S E L R E Q S D
gm053471_Glyma2    L R P L E S E F D E E E K I C D A I S E E H E H H F G R - P R S R E E A L H F L N E L G W L F Q R E R F S Y V H E V P Y
pt038233_POPTR_    L R L L E S E F D E N A V V S N I V S E E Q T R D L G R - P R S R E E V M H F L N E L G W L F Q R K S M P S M H E A P D
 
AT1G20980.1     F S L A R F K F L L V C S V E R D Y C A L I R T L L D M L V E R N L V N D E L N R E A L D M L A E I Q L L N R A V K R K
gm053471_Glyma2    Y S L D R F K F V L T F A V E R N C C M L V K T L L D V L V G K H L Q G E W L S T G S V E M L N A I Q L L N R A V K G K
pt038233_POPTR_    Y S L N R F K F L L I F S V E R D Y C V L V K T I L D M L V E R N T C R D E L S K E H L E M L Y E I Q L L N R S V K R R
 
AT1G20980.1     S T K M V E L L I H Y L V - - - - N P L T L S S S R K F V F L P N I T G P G G I T P L H L A A C T S G S D D M I D L L T
gm053471_Glyma2    Y V G M V D L L I H Y S I - P S K N - - - - G T S R K Y V F P P N L E G P G G I T P L H L A A G T S G S E S V V D S L T
pt038233_POPTR_    C R K M A D L L I H Y S I I G G D N - - - - - S S R T Y I F P P N V G G P G G I T P L H L A A C A S G S D G L V D A L T
 
AT1G20980.1     N D P Q E I G L S S W N T L R D A T G Q T P Y S Y A A I R N N H N Y N S L V A R K L A D K R N K Q V S L N I E H E V V D
gm053471_Glyma2    S D P Q E I G L K C W E S L V D A N G Q T P H A Y A M M R N N D S Y N A L V A H K L A D R R R G E I S V T I E N A - I E
pt038233_POPTR_    N D P H E I G L S C W N S V L D A N G L S P Y A Y A V M T K N H S Y N L L V A R K L A D K R N G Q I S V A I G N E - I E
 
AT1G20980.1     Q T G L S K R - - - L S L E - - - - - M N K S S S S C A S C A T V A L K Y Q R R V S G S Q R L F P T P I I H S M L A V A
gm053471_Glyma2    Q Q S L R V E - - - L K - E K Q S N L V K R G Q S S C A K C A N A E F R F N R R V P G S H G L L H R P F I Y S M L A V A
pt038233_POPTR_    Q A A L E Q E H V T I S - Q - - - - - F Q R E R K S C A K C A S V A A K M H G R F L G S Q G L L Q R P Y V H S M L A I A
 
AT1G20980.1     T V C V C V C V F M H A F P I V R Q G S H F S W G G L D Y G S I
gm053471_Glyma2    A V C V C V C V F F R G R P F V G S V A P F S W E N L D Y G T M
pt038233_POPTR_    A V C V C V C L F F R G A P D I G L V A P F K W E N L N Y G T I
 
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