fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000683 not found in 301aa AT1G21340.1 1st_1st 0.279197080 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G21340.1     MLPYIGHNSYQQHQFPLPEMEIP--EKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSL
pt000683_POPTR_ -----MYSATDQMMFQCPPRPLPKEKKWKSKVE----AAPNCPRCASPNTKFCYYNNYSL
                      :.: :*  *  *   :*  :*** . *    :** ******.************

AT1G21340.1     SQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRSR-----QNSHKRFGRNENRPDGL--
pt000683_POPTR_ SQPRYFCKGCRRYWTKGGSIRNVPVGGGCRKYRRAKSSKVSQNERAAVSVNYSRTNETTL
                *******************:**:********  *::     **.:  .. * .*.:    

AT1G21340.1     ---INQDD-GFQSSPPGSDIDLAAVFAQYVTDRSPSSTDNT------TGSDQDSPITTTT
pt000683_POPTR_ ACSTNKDSMAQQGGANGSDIDLAVVFAKFLNQDLSYEPDFTGEELLNEGGDQMVDVSNSS
                    *:*. . *... *******.***:::.:  . ..* *       *.**   ::.::

AT1G21340.1     HA---------LESLSW-DICQETDVDLGFYGEFNNLT-QKTKEDQEVFGQFLQEDREEI
pt000683_POPTR_ NPSDSFQNDSMMESLKRSDQIQESNL---LEGQSQVLVGEKQRLEEERIQELIESQDLNA
                :.         :***.  *  **:::   : *: : *. :* : ::* : ::::.:  : 

AT1G21340.1     FEFQGLLDDKEIQEILECSFSEEPD--------QLVSQGSF-----------MINGDNWS
pt000683_POPTR_ FGLQDLLSDEIVQDALWSDDATLPNFPNWQPMLQLQDFDSFSVDDRLKISSNFISDNSWS
                * :*.**.*: :*: * .. :  *:        ** . .**           :*..:.**

AT1G21340.1     STDLTRFGI----
pt000683_POPTR_ SLDLSGFEVFSRP
                * **: * :
BoxShade v3.31 C (beta, 970507) Output
AT1G21340.1     M L P Y I G H N S Y Q Q H Q F P L P E M E I P - - E K W K L S Y E Q E A I T A P A C P R C A S S N T K F C Y Y N N Y S L
pt000683_POPTR_    - - - - - M Y S A T D Q M M F Q C P P R P L P K E K K W K S K V E - - - - A A P N C P R C A S P N T K F C Y Y N N Y S L
 
AT1G21340.1     S Q P R Y F C K G C R R Y W T K G G S L R N I P V G G G C R K R S R S R - - - - - Q N S H K R F G R N E N R P D G L - -
pt000683_POPTR_    S Q P R Y F C K G C R R Y W T K G G S I R N V P V G G G C R K Y R R A K S S K V S Q N E R A A V S V N Y S R T N E T T L
 
AT1G21340.1     - - - I N Q D D - G F Q S S P P G S D I D L A A V F A Q Y V T D R S P S S T D N T - - - - - - T G S D Q D S P I T T T T
pt000683_POPTR_    A C S T N K D S M A Q Q G G A N G S D I D L A V V F A K F L N Q D L S Y E P D F T G E E L L N E G G D Q M V D V S N S S
 
AT1G21340.1     H A - - - - - - - - - L E S L S W - D I C Q E T D V D L G F Y G E F N N L T - Q K T K E D Q E V F G Q F L Q E D R E E I
pt000683_POPTR_    N P S D S F Q N D S M M E S L K R S D Q I Q E S N L - - - L E G Q S Q V L V G E K Q R L E E E R I Q E L I E S Q D L N A
 
AT1G21340.1     F E F Q G L L D D K E I Q E I L E C S F S E E P D - - - - - - - - Q L V S Q G S F - - - - - - - - - - - M I N G D N W S
pt000683_POPTR_    F G L Q D L L S D E I V Q D A L W S D D A T L P N F P N W Q P M L Q L Q D F D S F S V D D R L K I S S N F I S D N S W S
 
AT1G21340.1     S T D L T R F G I - - - -
pt000683_POPTR_    S L D L S G F E V F S R P
 
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