fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039881 not found in 220aa AT1G44830.1 not_not 0.419354838 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G21910.1     MVKQERKIQTSSTKKEMPLSSSPSSSSSSSSSSSSSSCKNKNKKSKIKKYKGVRMRSWGS
gm039881_Glyma1 MV-------------------------------------NDNKK---KKYKGVRMRSWGS
                **                                     *.***   *************

AT1G21910.1     WVSEIRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFPTSSSS--HHLLDNL
gm039881_Glyma1 WVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSSSQHYIIPQ-
                ******************************.*******..******:****  *::: : 

AT1G21910.1     LDENTLLSPKSIQRVAAQAANSF---------NHFAP--------TSSAVSSPSDH----
gm039881_Glyma1 --DTAMMSPKSIQRVAAAAANNFLDNNAIAINNATTPPSPPLASTSSSFVSSPSMSSSSP
                  :.:::********** ***.*         *  :*        :** *****      

AT1G21910.1     -DHHHDDGMQSLMGSF----VDNHVSLMDSTS-------SWYD----------DH--NGM
gm039881_Glyma1 LDQIDDD--VSLLTPFGAYTTTTATTICDETNESMAMMESWYDLEGLQSPKYVDQMLSGA
                 *: .**   **: .*    . . .:: *.*.       ****          *:  .* 

AT1G21910.1     FLFDNGAPFNYSPQLNSTTMLDEYFYEDADIPLWSFN
gm039881_Glyma1 F-FD----------IDSTQLLDD-LYEESDIRLWSFC
                * **          ::** :**: :**::** ****
BoxShade v3.31 C (beta, 970507) Output
AT1G21910.1     M V K Q E R K I Q T S S T K K E M P L S S S P S S S S S S S S S S S S S S C K N K N K K S K I K K Y K G V R M R S W G S
gm039881_Glyma1    M V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N D N K K - - - K K Y K G V R M R S W G S
 
AT1G21910.1     W V S E I R A P N Q K T R I W L G S Y S T A E A A A R A Y D V A L L C L K G P Q A N L N F P T S S S S - - H H L L D N L
gm039881_Glyma1    W V S E I R A P N Q K T R I W L G S Y S T A E A A A R A Y D A A L L C L K G S S A N L N F P S S S S S S Q H Y I I P Q -
 
AT1G21910.1     L D E N T L L S P K S I Q R V A A Q A A N S F - - - - - - - - - N H F A P - - - - - - - - T S S A V S S P S D H - - - -
gm039881_Glyma1    - - D T A M M S P K S I Q R V A A A A A N N F L D N N A I A I N N A T T P P S P P L A S T S S S F V S S P S M S S S S P
 
AT1G21910.1     - D H H H D D G M Q S L M G S F - - - - V D N H V S L M D S T S - - - - - - - S W Y D - - - - - - - - - - D H - - N G M
gm039881_Glyma1    L D Q I D D D - - V S L L T P F G A Y T T T T A T T I C D E T N E S M A M M E S W Y D L E G L Q S P K Y V D Q M L S G A
 
AT1G21910.1     F L F D N G A P F N Y S P Q L N S T T M L D E Y F Y E D A D I P L W S F N
gm039881_Glyma1    F - F D - - - - - - - - - - I D S T Q L L D D - L Y E E S D I R L W S F C
 
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