fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038409 not found in 214aa AT1G77640.1 1st_not 0.410557184 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G21910.1     MVKQERKIQTSSTKKEMPLSSSPSSSSSSSSSSSSSSCKNKNKKSKIKKYKGVRMRSWGS
pt038409_POPTR_ MVKNEHKIQ-SETSTPMP--------------TSSSACKK-------KKYKGVRMRSWGS
                ***:*:*** *.*.. **              :***:**:       *************

AT1G21910.1     WVSEIRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFPTSSSSHHLLDNLLD
pt038409_POPTR_ WVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPI-TSSHYIPD----
                *********************.********.*******..******  :***:: *    

AT1G21910.1     ENTLLSPKSIQRVAAQAANSFNHFAPTS----------------------SAVSSPSDHD
pt038409_POPTR_ --AVMSPKSIQRVAAAAANS-SEDNPTTPQVSSLPLPSSSSSSSSILSSPSMVSSPSDQP
                  :::********** **** ..  **:                      * ******: 

AT1G21910.1     HHHDDGMQSLMGSF-VDNH-VSLMDSTSSWYDDHNGMFLFD------------NGAPFNY
pt038409_POPTR_ ---DDYM-SLMESFETDNEPIPMLD---SWYN-------FDGLQSPKYIDQMFNGVSFN-
                   ** * *** ** .**. :.::*   ***:       **            **..** 

AT1G21910.1     SPQLNSTTMLDEYFYEDADIPLWSFN-
pt038409_POPTR_ ------PPMIDD-FYE-GDIRLWSFAE
                      ..*:*: *** .** ****
BoxShade v3.31 C (beta, 970507) Output
AT1G21910.1     M V K Q E R K I Q T S S T K K E M P L S S S P S S S S S S S S S S S S S S C K N K N K K S K I K K Y K G V R M R S W G S
pt038409_POPTR_    M V K N E H K I Q - S E T S T P M P - - - - - - - - - - - - - - T S S S A C K K - - - - - - - K K Y K G V R M R S W G S
 
AT1G21910.1     W V S E I R A P N Q K T R I W L G S Y S T A E A A A R A Y D V A L L C L K G P Q A N L N F P T S S S S H H L L D N L L D
pt038409_POPTR_    W V S E I R A P N Q K T R I W L G S Y S T P E A A A R A Y D A A L L C L K G S S A N L N F P I - T S S H Y I P D - - - -
 
AT1G21910.1     E N T L L S P K S I Q R V A A Q A A N S F N H F A P T S - - - - - - - - - - - - - - - - - - - - - - S A V S S P S D H D
pt038409_POPTR_    - - A V M S P K S I Q R V A A A A A N S - S E D N P T T P Q V S S L P L P S S S S S S S S I L S S P S M V S S P S D Q P
 
AT1G21910.1     H H H D D G M Q S L M G S F - V D N H - V S L M D S T S S W Y D D H N G M F L F D - - - - - - - - - - - - N G A P F N Y
pt038409_POPTR_    - - - D D Y M - S L M E S F E T D N E P I P M L D - - - S W Y N - - - - - - - F D G L Q S P K Y I D Q M F N G V S F N -
 
AT1G21910.1     S P Q L N S T T M L D E Y F Y E D A D I P L W S F N -
pt038409_POPTR_    - - - - - - P P M I D D - F Y E - G D I R L W S F A E
 
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