fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm010883 not found in 232aa AT1G44830.1 1st_not 0.428152492 II
Gm014828 not found in 231aa AT1G21910.1 not_1st 0.422287390 II
Gm039881 not found in 220aa AT1G44830.1 not_not 0.419354838 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G21910.1     MVKQERKIQTSSTKKEMPLSSSPSSSSSSSSSSSSSSCKNKNKKSKIKKYKGVRMRSWGS
gm014828_Glyma0 MVKSEHKIKTEPSSKAMRL------SSPSSS---TSDCKK-------KKYKGVRMRSWGS
gm039881_Glyma1 MV---------------------------------NDNKK-------KKYKGVRMRSWGS
gm010883_Glyma0 MVKLEHKIKTEPSSKEMRL------SSLSSSASTSSDCKK-------KKYKGVRMRSWGS
                **                                 .. *:       *************

AT1G21910.1     WVSEIRAPNQKTRIWLGSYSTAEAAARAYDVALLCLKGPQANLNFP--TSSSSHHLLDNL
gm014828_Glyma0 WVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFP--LSSSQQY----I
gm039881_Glyma1 WVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSSSQHYI---I
gm010883_Glyma0 WVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFP--LSSSQQY----I
                *********************.********.*******..******   ***.::    :

AT1G21910.1     LDENTLLSPKSIQRVAAQAANSF---------NHFAPT----------SSAVSSPSD---
gm014828_Glyma0 PGD-AVMSPKSIQRVAAAAANSFID-------NATTPPSPPPASTPSSSSLASSPSL-VS
gm039881_Glyma1 PQDTAMMSPKSIQRVAAAAANNFLDNNAIAINNATTPPSPPLASTS--SSFVSSPSMSSS
gm010883_Glyma0 PGE-AVMSPKSIQRVAAAAANSFID-------NANTPPSPPPASNP--SSLASSPSL-VS
                  : :::********** ***.*         *  :*.          ** .****    

AT1G21910.1     --HDHHHDDGMQSLMGSF-----------VD--NHVSLMDSTSSWYDDHNGMFLFDNGAP
gm014828_Glyma0 SPSDQIDDDA--LLISSFQAYTS------CGQANQSMAVNVMEPWYTFGDGL-----QSP
gm039881_Glyma1 SPLDQIDDDV--SLLTPFGAYTTTTATTICDETNESMAM--MESWYDL-EGL-----QSP
gm010883_Glyma0 SPSDQIDDNA--SLISSFEAYTS------CDQANQPMTMNVMEPWYTFADGL-----QSP
                   *: .*:    *: .*            .  *.   :   ..**   :*:      :*

AT1G21910.1     FNYSPQL--------NSTTMLDEYFYEDADIPLWSFN
gm014828_Glyma0 -KYADQMLSGDFFHVDSSHLLDD-LYEESDIRLWSFC
gm039881_Glyma1 -KYVDQMLSGAFFDIDSTQLLDD-LYEESDIRLWSFC
gm010883_Glyma0 -KYVDQMLSGAFFDFDSSHLFDD-LYEESDIRLWSFC
                 :*  *:        :*: ::*: :**::** ****
BoxShade v3.31 C (beta, 970507) Output
AT1G21910.1     M V K Q E R K I Q T S S T K K E M P L S S S P S S S S S S S S S S S S S S C K N K N K K S K I K K Y K G V R M R S W G S
gm014828_Glyma0    M V K S E H K I K T E P S S K A M R L - - - - - - S S P S S S - - - T S D C K K - - - - - - - K K Y K G V R M R S W G S
gm039881_Glyma1    M V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N D N K K - - - - - - - K K Y K G V R M R S W G S
gm010883_Glyma0    M V K L E H K I K T E P S S K E M R L - - - - - - S S L S S S A S T S S D C K K - - - - - - - K K Y K G V R M R S W G S
 
AT1G21910.1     W V S E I R A P N Q K T R I W L G S Y S T A E A A A R A Y D V A L L C L K G P Q A N L N F P - - T S S S S H H L L D N L
gm014828_Glyma0    W V S E I R A P N Q K T R I W L G S Y S T P E A A A R A Y D A A L L C L K G S S A N L N F P - - L S S S Q Q Y - - - - I
gm039881_Glyma1    W V S E I R A P N Q K T R I W L G S Y S T A E A A A R A Y D A A L L C L K G S S A N L N F P S S S S S S Q H Y I - - - I
gm010883_Glyma0    W V S E I R A P N Q K T R I W L G S Y S T P E A A A R A Y D A A L L C L K G S S A N L N F P - - L S S S Q Q Y - - - - I
 
AT1G21910.1     L D E N T L L S P K S I Q R V A A Q A A N S F - - - - - - - - - N H F A P T - - - - - - - - - - S S A V S S P S D - - -
gm014828_Glyma0    P G D - A V M S P K S I Q R V A A A A A N S F I D - - - - - - - N A T T P P S P P P A S T P S S S S L A S S P S L - V S
gm039881_Glyma1    P Q D T A M M S P K S I Q R V A A A A A N N F L D N N A I A I N N A T T P P S P P L A S T S - - S S F V S S P S M S S S
gm010883_Glyma0    P G E - A V M S P K S I Q R V A A A A A N S F I D - - - - - - - N A N T P P S P P P A S N P - - S S L A S S P S L - V S
 
AT1G21910.1     - - H D H H H D D G M Q S L M G S F - - - - - - - - - - - V D - - N H V S L M D S T S S W Y D D H N G M F L F D N G A P
gm014828_Glyma0    S P S D Q I D D D A - - L L I S S F Q A Y T S - - - - - - C G Q A N Q S M A V N V M E P W Y T F G D G L - - - - - Q S P
gm039881_Glyma1    S P L D Q I D D D V - - S L L T P F G A Y T T T T A T T I C D E T N E S M A M - - M E S W Y D L - E G L - - - - - Q S P
gm010883_Glyma0    S P S D Q I D D N A - - S L I S S F E A Y T S - - - - - - C D Q A N Q P M T M N V M E P W Y T F A D G L - - - - - Q S P
 
AT1G21910.1     F N Y S P Q L - - - - - - - - N S T T M L D E Y F Y E D A D I P L W S F N
gm014828_Glyma0    - K Y A D Q M L S G D F F H V D S S H L L D D - L Y E E S D I R L W S F C
gm039881_Glyma1    - K Y V D Q M L S G A F F D I D S T Q L L D D - L Y E E S D I R L W S F C
gm010883_Glyma0    - K Y V D Q M L S G A F F D F D S S H L F D D - L Y E E S D I R L W S F C
 
0