fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045576 not found in 226aa AT5G47670.1 not_not 0.471464019 III
Gm053423 not found in 168aa AT5G47670.1 not_not 0.426799007 III
Gm006497 not found in 181aa AT5G47670.1 not_not 0.419354838 III
Pt006104 not found in 189aa AT5G47670.2 not_not 0.439205955 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G21970.1     --MERGAPFSHYQLPKSISELNLD-QHSNNPTPMTSSVVVAGAGDKNNGIVVQQQPPCVA
pt006104_POPTR_ --MGTAS-------SSTQAQL----------------DGNAPHGRQDD------INECTV
gm053423_Glyma2 -----------------MAGV---------------------------------------
gm045576_Glyma1 --METGGFHGYRKLPNTTAGLKLSVSDMNMRQQVASSDHSAATGEE---------NECTV
gm006497_Glyma0 MFIPDFEFHG----CNIMAGV---------------------------------------
                                  : :                                       

AT1G21970.1     REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKT
pt006104_POPTR_ REQDRFMPIANVIRIMRKILPSHAKISDDAKETIQECVSEYISFITSEANERCQREQRKT
gm053423_Glyma2 REQDQYMPIANVIRIMRRILPAHAKISDDAKETIQECVSEYISFITAEANERCQREQRKT
gm045576_Glyma1 REQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKT
gm006497_Glyma0 REQDQYMPIANVIRIMRRILPAHAKISDDAKETIQECVSEYISFITAEANERCQREQRKT
                ****::***********: **.**********************:*.*************

AT1G21970.1     ITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQT--YGGNGIG-
pt006104_POPTR_ ITAEDVLYAMSKLGFDDYIEPLTIYLHRYRELEGERSS-MRCE-PLVKST----------
gm053423_Glyma2 VTAEDVLWAMEKLGFDNYAHPLSLYLHRYRESEGEPAS-VR------RAS---SAMGINN
gm045576_Glyma1 ITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTS-MRGE-PLGKRTVEYATLGVAT
gm006497_Glyma0 VTAEDVLWAMEKLGFDNYAHPLSLYLHRYRKTEGEPAS-AR------RAS---ASASPSM
                :****:*:**.*****:* .**:::::***: * :  *  *      : :          

AT1G21970.1     -FHGPSHG-LPPPGPYGYGMLDQSMVMGGGRY--------YQNGSSGQDESSVGGGS--S
pt006104_POPTR_ -------------RNNNNNVDQFGAMAGVGAY--------APAFHVSHHHHGFFGGS--S
gm053423_Glyma2 NM-------VHPPYINSHGF---------GMF--DFDPS-SQGFYRDDHNAASGSGG---
gm045576_Glyma1 AF-------VPPPYHHHNGY--FGAAMPMGTYVREAPPNTASSHHHHHHHH--------H
gm006497_Glyma0 QMHPRTHPHSHPPNYSHHGF---------GMF--DFDPS-SQGFYRDD---ASSSGSEQV
                                  .          * :               .            

AT1G21970.1     SSI--NGMPAFDHYGQYK------
pt006104_POPTR_ HAA---ALANVEAFAQHK------
gm053423_Glyma2 ------FVAPFDPYANIKRDAL--
gm045576_Glyma1 HAR---GISNA-----HEPNARSI
gm006497_Glyma0 HAYMFHLVS---------------
                       :.
BoxShade v3.31 C (beta, 970507) Output
AT1G21970.1     - - M E R G A P F S H Y Q L P K S I S E L N L D - Q H S N N P T P M T S S V V V A G A G D K N N G I V V Q Q Q P P C V A
pt006104_POPTR_    - - M G T A S - - - - - - - S S T Q A Q L - - - - - - - - - - - - - - - - D G N A P H G R Q D D - - - - - - I N E C T V
gm053423_Glyma2    - - - - - - - - - - - - - - - - - M A G V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm045576_Glyma1    - - M E T G G F H G Y R K L P N T T A G L K L S V S D M N M R Q Q V A S S D H S A A T G E E - - - - - - - - - N E C T V
gm006497_Glyma0    M F I P D F E F H G - - - - C N I M A G V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G21970.1     R E Q D Q Y M P I A N V I R I M R K T L P S H A K I S D D A K E T I Q E C V S E Y I S F V T G E A N E R C Q R E Q R K T
pt006104_POPTR_    R E Q D R F M P I A N V I R I M R K I L P S H A K I S D D A K E T I Q E C V S E Y I S F I T S E A N E R C Q R E Q R K T
gm053423_Glyma2    R E Q D Q Y M P I A N V I R I M R R I L P A H A K I S D D A K E T I Q E C V S E Y I S F I T A E A N E R C Q R E Q R K T
gm045576_Glyma1    R E Q D R F M P I A N V I R I M R K I L P P H A K I S D D A K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R K T
gm006497_Glyma0    R E Q D Q Y M P I A N V I R I M R R I L P A H A K I S D D A K E T I Q E C V S E Y I S F I T A E A N E R C Q R E Q R K T
 
AT1G21970.1     I T A E D I L W A M S K L G F D N Y V D P L T V F I N R Y R E I E T D R G S A L R G E P P S L R Q T - - Y G G N G I G -
pt006104_POPTR_    I T A E D V L Y A M S K L G F D D Y I E P L T I Y L H R Y R E L E G E R S S - M R C E - P L V K S T - - - - - - - - - -
gm053423_Glyma2    V T A E D V L W A M E K L G F D N Y A H P L S L Y L H R Y R E S E G E P A S - V R - - - - - - R A S - - - S A M G I N N
gm045576_Glyma1    I T A E D V L W A M S K L G F D D Y I E P L T M Y L H R Y R E L E G D R T S - M R G E - P L G K R T V E Y A T L G V A T
gm006497_Glyma0    V T A E D V L W A M E K L G F D N Y A H P L S L Y L H R Y R K T E G E P A S - A R - - - - - - R A S - - - A S A S P S M
 
AT1G21970.1     - F H G P S H G - L P P P G P Y G Y G M L D Q S M V M G G G R Y - - - - - - - - Y Q N G S S G Q D E S S V G G G S - - S
pt006104_POPTR_    - - - - - - - - - - - - - R N N N N N V D Q F G A M A G V G A Y - - - - - - - - A P A F H V S H H H H G F F G G S - - S
gm053423_Glyma2    N M - - - - - - - V H P P Y I N S H G F - - - - - - - - - G M F - - D F D P S - S Q G F Y R D D H N A A S G S G G - - -
gm045576_Glyma1    A F - - - - - - - V P P P Y H H H N G Y - - F G A A M P M G T Y V R E A P P N T A S S H H H H H H H H - - - - - - - - H
gm006497_Glyma0    Q M H P R T H P H S H P P N Y S H H G F - - - - - - - - - G M F - - D F D P S - S Q G F Y R D D - - - A S S S G S E Q V
 
AT1G21970.1     S S I - - N G M P A F D H Y G Q Y K - - - - - -
pt006104_POPTR_    H A A - - - A L A N V E A F A Q H K - - - - - -
gm053423_Glyma2    - - - - - - F V A P F D P Y A N I K R D A L - -
gm045576_Glyma1    H A R - - - G I S N A - - - - - H E P N A R S I
gm006497_Glyma0    H A Y M F H L V S - - - - - - - - - - - - - - -
 
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