fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044860 not found in 231aa AT5G47670.1 1st_not 0.441687344 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G21970.1     MERGAPFSHYQLPKSISELNLD----QHSNNPTPMTSSVVVAGAGDKNNGIVVQQQPPCV
pt044860_POPTR_ MDRGGFHGYRKHANTSSEINMRLAEINHSTTNKFHTTTDDIS---------------ECT
                *:**. ..: : .:: **:*:     :**.. .  *::  ::                *.

AT1G21970.1     AREQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRK
pt044860_POPTR_ VREQDRFMPIANVIRIMRKMLPPHGKISDDAKETIQECVSEFISFITSEANERCQREQRK
                .****::************ **.*.****************:***:*.************

AT1G21970.1     TITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQT---------
pt044860_POPTR_ TITAEDVLYAMSKLGFDDYIEPLTIYLHRYRELEGERGS-MRGEP--LMKTRNSNNNNNV
                ******:*:********:*::***::::****:* :*** :****  * :*         

AT1G21970.1     --YG----GNGIGF---------HGP-SHGLPPPGPYGYGMLDQSMVMGGGRYYQNGSSG
pt044860_POPTR_ DQYGTLMAGAGAAYAPAFHVSHHHHPHHHGFFGGAPIGAGY----MTM------------
                  **    * * .:         * *  **:   .* * *     *.*            

AT1G21970.1     QDESSVGGGSSSSINGMPAFDHYGQYK
pt044860_POPTR_ RDANS--NASSSHSAALANVEAFAQHQ
                :* .*  ..***   .:. .: :.*::
BoxShade v3.31 C (beta, 970507) Output
AT1G21970.1     M E R G A P F S H Y Q L P K S I S E L N L D - - - - Q H S N N P T P M T S S V V V A G A G D K N N G I V V Q Q Q P P C V
pt044860_POPTR_    M D R G G F H G Y R K H A N T S S E I N M R L A E I N H S T T N K F H T T T D D I S - - - - - - - - - - - - - - - E C T
 
AT1G21970.1     A R E Q D Q Y M P I A N V I R I M R K T L P S H A K I S D D A K E T I Q E C V S E Y I S F V T G E A N E R C Q R E Q R K
pt044860_POPTR_    V R E Q D R F M P I A N V I R I M R K M L P P H G K I S D D A K E T I Q E C V S E F I S F I T S E A N E R C Q R E Q R K
 
AT1G21970.1     T I T A E D I L W A M S K L G F D N Y V D P L T V F I N R Y R E I E T D R G S A L R G E P P S L R Q T - - - - - - - - -
pt044860_POPTR_    T I T A E D V L Y A M S K L G F D D Y I E P L T I Y L H R Y R E L E G E R G S - M R G E P - - L M K T R N S N N N N N V
 
AT1G21970.1     - - Y G - - - - G N G I G F - - - - - - - - - H G P - S H G L P P P G P Y G Y G M L D Q S M V M G G G R Y Y Q N G S S G
pt044860_POPTR_    D Q Y G T L M A G A G A A Y A P A F H V S H H H H P H H H G F F G G A P I G A G Y - - - - M T M - - - - - - - - - - - -
 
AT1G21970.1     Q D E S S V G G G S S S S I N G M P A F D H Y G Q Y K
pt044860_POPTR_    R D A N S - - N A S S S H S A A L A N V E A F A Q H Q
 
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