fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006104 not found in 189aa AT5G47670.2 not_not 0.439205955 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G21970.1     MERGAPFSHYQLPKSISELNLDQHSNNPTPMTSSVVVAGAGDKNNGIVVQQQPPCVAREQ
pt006104_POPTR_ MGTASSSTQAQL-----------DGNAP---------HGRQDDIN--------ECTVREQ
                *  .:. :: **           ..* *          *  *. *         *..***

AT1G21970.1     DQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITA
pt006104_POPTR_ DRFMPIANVIRIMRKILPSHAKISDDAKETIQECVSEYISFITSEANERCQREQRKTITA
                *::************ *************************:*.****************

AT1G21970.1     EDILWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTYGGNGIGFHGPSH
pt006104_POPTR_ EDVLYAMSKLGFDDYIEPLTIYLHRYRELEGER-SSMRCE-PLVKSTRNNN---------
                **:*:********:*::***::::****:* :* *::* * * ::.* ..*         

AT1G21970.1     GLPPPGPYGYGMLDQSMVMGG-GRYYQNGSSGQDESSVGGGSSSSINGMPAFDHYGQYK
pt006104_POPTR_ ----------NNVDQFGAMAGVGAYAPAFHVSHHHHGFFGGSSHAA-ALANVEAFAQHK
                          . :**  .*.* * *      .:.. .. **** :  .:. .: :.*:*
BoxShade v3.31 C (beta, 970507) Output
AT1G21970.1     M E R G A P F S H Y Q L P K S I S E L N L D Q H S N N P T P M T S S V V V A G A G D K N N G I V V Q Q Q P P C V A R E Q
pt006104_POPTR_    M G T A S S S T Q A Q L - - - - - - - - - - - D G N A P - - - - - - - - - H G R Q D D I N - - - - - - - - E C T V R E Q
 
AT1G21970.1     D Q Y M P I A N V I R I M R K T L P S H A K I S D D A K E T I Q E C V S E Y I S F V T G E A N E R C Q R E Q R K T I T A
pt006104_POPTR_    D R F M P I A N V I R I M R K I L P S H A K I S D D A K E T I Q E C V S E Y I S F I T S E A N E R C Q R E Q R K T I T A
 
AT1G21970.1     E D I L W A M S K L G F D N Y V D P L T V F I N R Y R E I E T D R G S A L R G E P P S L R Q T Y G G N G I G F H G P S H
pt006104_POPTR_    E D V L Y A M S K L G F D D Y I E P L T I Y L H R Y R E L E G E R - S S M R C E - P L V K S T R N N N - - - - - - - - -
 
AT1G21970.1     G L P P P G P Y G Y G M L D Q S M V M G G - G R Y Y Q N G S S G Q D E S S V G G G S S S S I N G M P A F D H Y G Q Y K
pt006104_POPTR_    - - - - - - - - - - N N V D Q F G A M A G V G A Y A P A F H V S H H H H G F F G G S S H A A - A L A N V E A F A Q H K
 
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