fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044860 not found in 231aa AT5G47670.1 1st_not 0.441687344 II
Pt006104 not found in 189aa AT5G47670.2 not_not 0.439205955 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G21970.1     MERGAPFSHYQLPKSISELNLDQ------HSNNPTPMTSSVVVAGAGDKNNGIVVQQQPP
pt044860_POPTR_ MDRGGFHGYRKHANTSSEINMRLAEINHSTTNKFHTTTDDI-----------------SE
pt006104_POPTR_ -----------MGTASSSTQAQL------DGNAPHGRQDDI-----------------NE
                             .: *. :           *      ..:                   

AT1G21970.1     CVAREQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQ
pt044860_POPTR_ CTVREQDRFMPIANVIRIMRKMLPPHGKISDDAKETIQECVSEFISFITSEANERCQREQ
pt006104_POPTR_ CTVREQDRFMPIANVIRIMRKILPSHAKISDDAKETIQECVSEYISFITSEANERCQREQ
                *..****::************ **.*.****************:***:*.**********

AT1G21970.1     RKTITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQT-------
pt044860_POPTR_ RKTITAEDVLYAMSKLGFDDYIEPLTIYLHRYRELEGERGS-MRGEP--LMKTRNSNNNN
pt006104_POPTR_ RKTITAEDVLYAMSKLGFDDYIEPLTIYLHRYRELEGERSS-MRCEP--LVKS-TRNNNN
                ********:*:********:*::***::::****:* :*.* :* **  * ::       

AT1G21970.1     ----YGG--NGIG------FHGPSHGLPPPGPYGYGMLDQSMVMGGGRYYQNGSSGQDES
pt044860_POPTR_ NVDQYGTLMAGAGAAYAPAFHVSHHH----HPHHHGFF------GGAPIGAGYMTMRDAN
pt006104_POPTR_ NVDQFGA-MAGVG-AYAPAFHVSH--------HHHGFF------GG--------------
                    :*    * *      ** .         : :*::      **              

AT1G21970.1     SVGGGSSSSINGMPAFDHYGQYK
pt044860_POPTR_ S--NASSSHSAALANVEAFAQHQ
pt006104_POPTR_ ------SSHAAALANVEAFAQHK
                      **   .:. .: :.*::
BoxShade v3.31 C (beta, 970507) Output
AT1G21970.1     M E R G A P F S H Y Q L P K S I S E L N L D Q - - - - - - H S N N P T P M T S S V V V A G A G D K N N G I V V Q Q Q P P
pt044860_POPTR_    M D R G G F H G Y R K H A N T S S E I N M R L A E I N H S T T N K F H T T T D D I - - - - - - - - - - - - - - - - - S E
pt006104_POPTR_    - - - - - - - - - - - M G T A S S S T Q A Q L - - - - - - D G N A P H G R Q D D I - - - - - - - - - - - - - - - - - N E
 
AT1G21970.1     C V A R E Q D Q Y M P I A N V I R I M R K T L P S H A K I S D D A K E T I Q E C V S E Y I S F V T G E A N E R C Q R E Q
pt044860_POPTR_    C T V R E Q D R F M P I A N V I R I M R K M L P P H G K I S D D A K E T I Q E C V S E F I S F I T S E A N E R C Q R E Q
pt006104_POPTR_    C T V R E Q D R F M P I A N V I R I M R K I L P S H A K I S D D A K E T I Q E C V S E Y I S F I T S E A N E R C Q R E Q
 
AT1G21970.1     R K T I T A E D I L W A M S K L G F D N Y V D P L T V F I N R Y R E I E T D R G S A L R G E P P S L R Q T - - - - - - -
pt044860_POPTR_    R K T I T A E D V L Y A M S K L G F D D Y I E P L T I Y L H R Y R E L E G E R G S - M R G E P - - L M K T R N S N N N N
pt006104_POPTR_    R K T I T A E D V L Y A M S K L G F D D Y I E P L T I Y L H R Y R E L E G E R S S - M R C E P - - L V K S - T R N N N N
 
AT1G21970.1     - - - - Y G G - - N G I G - - - - - - F H G P S H G L P P P G P Y G Y G M L D Q S M V M G G G R Y Y Q N G S S G Q D E S
pt044860_POPTR_    N V D Q Y G T L M A G A G A A Y A P A F H V S H H H - - - - H P H H H G F F - - - - - - G G A P I G A G Y M T M R D A N
pt006104_POPTR_    N V D Q F G A - M A G V G - A Y A P A F H V S H - - - - - - - - H H H G F F - - - - - - G G - - - - - - - - - - - - - -
 
AT1G21970.1     S V G G G S S S S I N G M P A F D H Y G Q Y K
pt044860_POPTR_    S - - N A S S S H S A A L A N V E A F A Q H Q
pt006104_POPTR_    - - - - - - S S H A A A L A N V E A F A Q H K
 
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