fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010924 not found in 276aa AT5G47670.2 1st_not 0.451612903 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G21970.1     MERGAPFSHYQLPKSISELNLDQHSNNPTPMTSSVVVAGA-------GDKNNGIVVQQQP
Sb010924_Sorbi1 ------------------------------MDSSFLPAGAESGSVVSGGANNGAAAQQQA
                                              * **.: ***       *. *** ..***.

AT1G21970.1     PCVAREQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQRE
Sb010924_Sorbi1 PPLIREQDRLMPIANVIRIMRRVLPAHAKISDDAQETIQECVSEYISFITGEANERCQRE
                * : ****: ***********:.**:********:*************:***********

AT1G21970.1     QRKTITAEDILWAMSKLGFDNYVDPLTVFINRYREIETD-RGSAL-------RG------
Sb010924_Sorbi1 QRKTITAEDVLWAMSRLGFDDYVEPLSVYLHRYRDFQGEARGVRLAPGAAPSRGGDHHHH
                *********:*****:****:**:**:*:::***::: : **  *       **      

AT1G21970.1     EPPSLRQTYGGNG------------IGFHGPSHG--LPP-PGP----YGYGML-------
Sb010924_Sorbi1 HPLKSRGPGGGSGAAMLPHHHHHHDMQMHAAMYGGTVPPAPGPPHHGHGHGFLMPHPQGG
                .* . * . **.*            : :*.. :*  :** ***    :*:*:*       

AT1G21970.1     --------------DQSMVM--GGGRYY---QNGSSGQDESSVGGGSSSSINGMPAFDHY
Sb010924_Sorbi1 SHYLPYPYEPTYGGEHAMAAYYGGAAAYAPGNGGGSGDGSGSSGGSASHTPQGSGGFEHP
                              :::*.   **.  *   :.*.**:...* **.:* : :*  .*:* 

AT1G21970.1     G--QYK
Sb010924_Sorbi1 HPFAYK
                    **
BoxShade v3.31 C (beta, 970507) Output
AT1G21970.1     M E R G A P F S H Y Q L P K S I S E L N L D Q H S N N P T P M T S S V V V A G A - - - - - - - G D K N N G I V V Q Q Q P
Sb010924_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D S S F L P A G A E S G S V V S G G A N N G A A A Q Q Q A
 
AT1G21970.1     P C V A R E Q D Q Y M P I A N V I R I M R K T L P S H A K I S D D A K E T I Q E C V S E Y I S F V T G E A N E R C Q R E
Sb010924_Sorbi1    P P L I R E Q D R L M P I A N V I R I M R R V L P A H A K I S D D A Q E T I Q E C V S E Y I S F I T G E A N E R C Q R E
 
AT1G21970.1     Q R K T I T A E D I L W A M S K L G F D N Y V D P L T V F I N R Y R E I E T D - R G S A L - - - - - - - R G - - - - - -
Sb010924_Sorbi1    Q R K T I T A E D V L W A M S R L G F D D Y V E P L S V Y L H R Y R D F Q G E A R G V R L A P G A A P S R G G D H H H H
 
AT1G21970.1     E P P S L R Q T Y G G N G - - - - - - - - - - - - I G F H G P S H G - - L P P - P G P - - - - Y G Y G M L - - - - - - -
Sb010924_Sorbi1    H P L K S R G P G G G S G A A M L P H H H H H H D M Q M H A A M Y G G T V P P A P G P P H H G H G H G F L M P H P Q G G
 
AT1G21970.1     - - - - - - - - - - - - - - D Q S M V M - - G G G R Y Y - - - Q N G S S G Q D E S S V G G G S S S S I N G M P A F D H Y
Sb010924_Sorbi1    S H Y L P Y P Y E P T Y G G E H A M A A Y Y G G A A A Y A P G N G G G S G D G S G S S G G S A S H T P Q G S G G F E H P
 
AT1G21970.1     G - - Q Y K
Sb010924_Sorbi1    H P F A Y K
 
0