fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045576 not found in 226aa AT5G47670.1 not_not 0.471464019 III
Gm053423 not found in 168aa AT5G47670.1 not_not 0.426799007 III
Gm006497 not found in 181aa AT5G47670.1 not_not 0.419354838 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G21970.1     --MERGAPFSHYQLPKSISELNLD-QHSNNPTPMTSSVVVAGAGDKNNGIVVQQQPPCVA
gm045576_Glyma1 --METGGFHGYRKLPNTTAGLKLSVSDMNMRQQVASSDHSAATGEENE---------CTV
gm006497_Glyma0 MFIPDFEFHGC----NIMAG---------------------------------------V
gm053423_Glyma2 -----------------MAG---------------------------------------V
                                  :                                        .

AT1G21970.1     REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKT
gm045576_Glyma1 REQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKT
gm006497_Glyma0 REQDQYMPIANVIRIMRRILPAHAKISDDAKETIQECVSEYISFITAEANERCQREQRKT
gm053423_Glyma2 REQDQYMPIANVIRIMRRILPAHAKISDDAKETIQECVSEYISFITAEANERCQREQRKT
                ****::***********: **.**********************:*.*************

AT1G21970.1     ITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQ---TYGGNGIG
gm045576_Glyma1 ITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSM-RGEPLGKRTVEYATLGVATA
gm006497_Glyma0 VTAEDVLWAMEKLGFDNYAHPLSLYLHRYRKTEGEPASA-RRAS--------ASASPSMQ
gm053423_Glyma2 VTAEDVLWAMEKLGFDNYAHPLSLYLHRYRESEGEPASV-RRAS--------SAMGINNN
                :****:****.*****:* .**:::::***: * :  *  *  .        :  .    

AT1G21970.1     FHGPSHG-LPPP--GPYG-YGMLD-QSMVMGGGRYYQNGSSGQDESSVGG--GSSSSING
gm045576_Glyma1 F-------VPPPYHHHNGYFGA----AMPMG---TYVREAPPNTASSHHHHHHHHHHARG
gm006497_Glyma0 MHPRTHPHSHPPNYSHHG-FGMFDFDPSSQG---FYRDD-----ASSSGSEQVHAYMFHL
gm053423_Glyma2 M-------VHPPYINSHG-FGMFDFDPSSQG---FYRDDH--NAASGSGG---------F
                :         **     * :*     .   *    *         *.             

AT1G21970.1     MPAFDHYGQYK----
gm045576_Glyma1 IS--NAHEPNARSI-
gm006497_Glyma0 VS-------------
gm053423_Glyma2 VAPFDPYANIKRDAL
                :.
BoxShade v3.31 C (beta, 970507) Output
AT1G21970.1     - - M E R G A P F S H Y Q L P K S I S E L N L D - Q H S N N P T P M T S S V V V A G A G D K N N G I V V Q Q Q P P C V A
gm045576_Glyma1    - - M E T G G F H G Y R K L P N T T A G L K L S V S D M N M R Q Q V A S S D H S A A T G E E N E - - - - - - - - - C T V
gm006497_Glyma0    M F I P D F E F H G C - - - - N I M A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V
gm053423_Glyma2    - - - - - - - - - - - - - - - - - M A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V
 
AT1G21970.1     R E Q D Q Y M P I A N V I R I M R K T L P S H A K I S D D A K E T I Q E C V S E Y I S F V T G E A N E R C Q R E Q R K T
gm045576_Glyma1    R E Q D R F M P I A N V I R I M R K I L P P H A K I S D D A K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R K T
gm006497_Glyma0    R E Q D Q Y M P I A N V I R I M R R I L P A H A K I S D D A K E T I Q E C V S E Y I S F I T A E A N E R C Q R E Q R K T
gm053423_Glyma2    R E Q D Q Y M P I A N V I R I M R R I L P A H A K I S D D A K E T I Q E C V S E Y I S F I T A E A N E R C Q R E Q R K T
 
AT1G21970.1     I T A E D I L W A M S K L G F D N Y V D P L T V F I N R Y R E I E T D R G S A L R G E P P S L R Q - - - T Y G G N G I G
gm045576_Glyma1    I T A E D V L W A M S K L G F D D Y I E P L T M Y L H R Y R E L E G D R T S M - R G E P L G K R T V E Y A T L G V A T A
gm006497_Glyma0    V T A E D V L W A M E K L G F D N Y A H P L S L Y L H R Y R K T E G E P A S A - R R A S - - - - - - - - A S A S P S M Q
gm053423_Glyma2    V T A E D V L W A M E K L G F D N Y A H P L S L Y L H R Y R E S E G E P A S V - R R A S - - - - - - - - S A M G I N N N
 
AT1G21970.1     F H G P S H G - L P P P - - G P Y G - Y G M L D - Q S M V M G G G R Y Y Q N G S S G Q D E S S V G G - - G S S S S I N G
gm045576_Glyma1    F - - - - - - - V P P P Y H H H N G Y F G A - - - - A M P M G - - - T Y V R E A P P N T A S S H H H H H H H H H H A R G
gm006497_Glyma0    M H P R T H P H S H P P N Y S H H G - F G M F D F D P S S Q G - - - F Y R D D - - - - - A S S S G S E Q V H A Y M F H L
gm053423_Glyma2    M - - - - - - - V H P P Y I N S H G - F G M F D F D P S S Q G - - - F Y R D D H - - N A A S G S G G - - - - - - - - - F
 
AT1G21970.1     M P A F D H Y G Q Y K - - - -
gm045576_Glyma1    I S - - N A H E P N A R S I -
gm006497_Glyma0    V S - - - - - - - - - - - - -
gm053423_Glyma2    V A P F D P Y A N I K R D A L
 
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