fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G21970.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019625 not found in 223aa AT5G47670.1 1st_not 0.478908188 II
Gm045576 not found in 226aa AT5G47670.1 not_not 0.471464019 III
Gm053423 not found in 168aa AT5G47670.1 not_not 0.426799007 III
Gm006497 not found in 181aa AT5G47670.1 not_not 0.419354838 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G21970.1     --MERGAPFSHYQLPKSISELNLDQHSNNPTPMTSSVVVAGAGDKNNGIVVQQQPPCVAR
gm019625_Glyma0 --METGGFHGYRKLPNTTSGLKLSVSDMNMNMRQQQVASSDQNCSNHSAA-GEENECTVR
gm006497_Glyma0 MFIPDFEFHGC----NIMAG--------------------------------------VR
gm053423_Glyma2 -----------------MAG--------------------------------------VR
gm045576_Glyma1 --METGGFHGYRKLPNTTAGLKLSVSDMNM---RQQVASSD-----HSAATGEENECTVR
                                  :                                       .*

AT1G21970.1     EQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTI
gm019625_Glyma0 EQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTI
gm006497_Glyma0 EQDQYMPIANVIRIMRRILPAHAKISDDAKETIQECVSEYISFITAEANERCQREQRKTV
gm053423_Glyma2 EQDQYMPIANVIRIMRRILPAHAKISDDAKETIQECVSEYISFITAEANERCQREQRKTV
gm045576_Glyma1 EQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTI
                ***::***********: **.**********************:*.*************:

AT1G21970.1     TAEDILWAMSKLGFDNYVDPLTVFINRYREIETDRGSALRGEPPSLRQTYGGN---GIGF
gm019625_Glyma0 TAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTS-MRGEPLGKRTVEYATL--ATAF
gm006497_Glyma0 TAEDVLWAMEKLGFDNYAHPLSLYLHRYRKTEGEPAS-AR------RASASASP--SMQM
gm053423_Glyma2 TAEDVLWAMEKLGFDNYAHPLSLYLHRYRESEGEPAS-VR------RASSAMGI--NNNM
gm045576_Glyma1 TAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTS-MRGEPLGKRTVEYATLGVATAF
                ****:****.*****:* .**:::::***: * :  *  *      *            :

AT1G21970.1     HGPSHG-LPPP--GPYG-YGMLD-QSMVMGGGRYYQNGSSGQDESSVGGG--SSSSINGM
gm019625_Glyma0 -------VPPPFHHHNGYFGA----AMPMG---TYVRETPPNAASSHHHH--------GI
gm006497_Glyma0 HPRTHPHSHPPNYSHHG-FGMFDFDPSSQG---FYRDD-----ASSSGSEQVHAYMFHLV
gm053423_Glyma2 -------VHPPYINSHG-FGMFDFDPSSQG---FYRDDH--NAASGSGG---------FV
gm045576_Glyma1 -------VPPPYHHHNGYFGA----AMPMG---TYVREAPPNTASSHHHHHHHHHHARGI
                         **     * :*     .   *    *         *.             :

AT1G21970.1     PAFDHYGQYK----
gm019625_Glyma0 S--NAHEPNARSI-
gm006497_Glyma0 S-------------
gm053423_Glyma2 APFDPYANIKRDAL
gm045576_Glyma1 S--NAHEPNARSI-
                .
BoxShade v3.31 C (beta, 970507) Output
AT1G21970.1     - - M E R G A P F S H Y Q L P K S I S E L N L D Q H S N N P T P M T S S V V V A G A G D K N N G I V V Q Q Q P P C V A R
gm019625_Glyma0    - - M E T G G F H G Y R K L P N T T S G L K L S V S D M N M N M R Q Q Q V A S S D Q N C S N H S A A - G E E N E C T V R
gm006497_Glyma0    M F I P D F E F H G C - - - - N I M A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V R
gm053423_Glyma2    - - - - - - - - - - - - - - - - - M A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V R
gm045576_Glyma1    - - M E T G G F H G Y R K L P N T T A G L K L S V S D M N M - - - R Q Q V A S S D - - - - - H S A A T G E E N E C T V R
 
AT1G21970.1     E Q D Q Y M P I A N V I R I M R K T L P S H A K I S D D A K E T I Q E C V S E Y I S F V T G E A N E R C Q R E Q R K T I
gm019625_Glyma0    E Q D R F M P I A N V I R I M R K I L P P H A K I S D D A K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R K T I
gm006497_Glyma0    E Q D Q Y M P I A N V I R I M R R I L P A H A K I S D D A K E T I Q E C V S E Y I S F I T A E A N E R C Q R E Q R K T V
gm053423_Glyma2    E Q D Q Y M P I A N V I R I M R R I L P A H A K I S D D A K E T I Q E C V S E Y I S F I T A E A N E R C Q R E Q R K T V
gm045576_Glyma1    E Q D R F M P I A N V I R I M R K I L P P H A K I S D D A K E T I Q E C V S E Y I S F I T G E A N E R C Q R E Q R K T I
 
AT1G21970.1     T A E D I L W A M S K L G F D N Y V D P L T V F I N R Y R E I E T D R G S A L R G E P P S L R Q T Y G G N - - - G I G F
gm019625_Glyma0    T A E D V L W A M S K L G F D D Y I E P L T M Y L H R Y R E L E G D R T S - M R G E P L G K R T V E Y A T L - - A T A F
gm006497_Glyma0    T A E D V L W A M E K L G F D N Y A H P L S L Y L H R Y R K T E G E P A S - A R - - - - - - R A S A S A S P - - S M Q M
gm053423_Glyma2    T A E D V L W A M E K L G F D N Y A H P L S L Y L H R Y R E S E G E P A S - V R - - - - - - R A S S A M G I - - N N N M
gm045576_Glyma1    T A E D V L W A M S K L G F D D Y I E P L T M Y L H R Y R E L E G D R T S - M R G E P L G K R T V E Y A T L G V A T A F
 
AT1G21970.1     H G P S H G - L P P P - - G P Y G - Y G M L D - Q S M V M G G G R Y Y Q N G S S G Q D E S S V G G G - - S S S S I N G M
gm019625_Glyma0    - - - - - - - V P P P F H H H N G Y F G A - - - - A M P M G - - - T Y V R E T P P N A A S S H H H H - - - - - - - - G I
gm006497_Glyma0    H P R T H P H S H P P N Y S H H G - F G M F D F D P S S Q G - - - F Y R D D - - - - - A S S S G S E Q V H A Y M F H L V
gm053423_Glyma2    - - - - - - - V H P P Y I N S H G - F G M F D F D P S S Q G - - - F Y R D D H - - N A A S G S G G - - - - - - - - - F V
gm045576_Glyma1    - - - - - - - V P P P Y H H H N G Y F G A - - - - A M P M G - - - T Y V R E A P P N T A S S H H H H H H H H H H A R G I
 
AT1G21970.1     P A F D H Y G Q Y K - - - -
gm019625_Glyma0    S - - N A H E P N A R S I -
gm006497_Glyma0    S - - - - - - - - - - - - -
gm053423_Glyma2    A P F D P Y A N I K R D A L
gm045576_Glyma1    S - - N A H E P N A R S I -
 
1