fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G22190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034828 not found in 311aa AT1G78080.1 not_not 0.430288461 III
Gm014755 not found in 302aa AT1G78080.1 not_not 0.430288461 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G22190.1     MTTSMDFYSNKTF-Q-QSDPFGGELMEALLPFIK-------------SPSNDSSAFAFSL
gm034828_Glyma1 MAATMNFYNETSQ-QVQSDPFRGELMEVLEPFMKTCPSSTPSILSSDSPS--PSSYSPLL
gm014755_Glyma0 MAALMDFYSSSPEFQLHSDPFRGELMEVLEPFMK-------------SPS--PNYF----
                *:: *:**....  * :**** *****.* **:*             ***  .. :    

AT1G22190.1     PA--------PISYGSDLHS-------FSH----------HLS-----------------
gm034828_Glyma1 PPHPSFSTYTPSAY---LFQNQQPLIGFEQ-QPSSLLGLNHLSTSQISQIQAQAQAQ---
gm014755_Glyma0 PSSPSL----PNLYSNGLSSNTQSLIGFGQAQPTSLVGLNHLTPSQISQIQAQIQIQAQQ
                *.        *  *   * .       * :          **:                 

AT1G22190.1     ------------PKPVSMKQTGTSAAKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGT
gm034828_Glyma1 ---NSLSLNFLGPKPVPMKHVG-GPAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGT
gm014755_Glyma0 HQNRSNTLSFLGPKPIPMKHAG-MPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGT
                            ***:.**:.*  ..************************:*********

AT1G22190.1     FDTAEEAALAYDKAAYKLRGDFARLNFPDLRHN--------DEYQPLQSSVDAKLEAICQ
gm034828_Glyma1 FDTAEEAALAYDKAAYRLRGDLARLNFPNLK--GSCPG---EEYKPMQAAVDAKLDAICA
gm014755_Glyma0 FDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSSVGGDFGEYKPLHSAVDAKLQAICE
                ****************:****:******:*:           **:*::::*****:*** 

AT1G22190.1     NLAETTQKQVRSTK--KSSSRKRSSTVAVKLPEEDYSSAGSSPLLTESYGSGGSSSPLSE
gm034828_Glyma1 NLAE-MQKQGKNEKGARSGKKSKQGPNLEAKPEPEASGSGAAALSPESEGS-ADSSALSD
gm014755_Glyma0 GLAE-LQKQGKTEKPPRK-SRSKLAEKVVSDKENNNSCKVEAA-SWSSEG----SSPLSD
                .***  *** :. *  :. .:.: .       * : *    :.   .* *    **.**:

AT1G22190.1     LTFGDTEEEIQPPWNENA----LEKYPSYEIDWDSILQCSSLVN
gm034828_Glyma1 LTF-DVTE---PQWEDASAHFNLQKFPSYEIDWDSL--------
gm014755_Glyma0 LTFADVSE---AQWEGDSDNYNLQKYPSYEIDWDSL--------
                *** *. *   . *:  :    *:*:*********:
BoxShade v3.31 C (beta, 970507) Output
AT1G22190.1     M T T S M D F Y S N K T F - Q - Q S D P F G G E L M E A L L P F I K - - - - - - - - - - - - - S P S N D S S A F A F S L
gm034828_Glyma1    M A A T M N F Y N E T S Q - Q V Q S D P F R G E L M E V L E P F M K T C P S S T P S I L S S D S P S - - P S S Y S P L L
gm014755_Glyma0    M A A L M D F Y S S S P E F Q L H S D P F R G E L M E V L E P F M K - - - - - - - - - - - - - S P S - - P N Y F - - - -
 
AT1G22190.1     P A - - - - - - - - P I S Y G S D L H S - - - - - - - F S H - - - - - - - - - - H L S - - - - - - - - - - - - - - - - -
gm034828_Glyma1    P P H P S F S T Y T P S A Y - - - L F Q N Q Q P L I G F E Q - Q P S S L L G L N H L S T S Q I S Q I Q A Q A Q A Q - - -
gm014755_Glyma0    P S S P S L - - - - P N L Y S N G L S S N T Q S L I G F G Q A Q P T S L V G L N H L T P S Q I S Q I Q A Q I Q I Q A Q Q
 
AT1G22190.1     - - - - - - - - - - - - P K P V S M K Q T G T S A A K P T K L Y R G V R Q R H W G K W V A E I R L P R N R T R L W L G T
gm034828_Glyma1    - - - N S L S L N F L G P K P V P M K H V G - G P A K P T K L Y R G V R Q R H W G K W V A E I R L P K N R T R L W L G T
gm014755_Glyma0    H Q N R S N T L S F L G P K P I P M K H A G - M P P K P T K L Y R G V R Q R H W G K W V A E I R L P K N R T R L W L G T
 
AT1G22190.1     F D T A E E A A L A Y D K A A Y K L R G D F A R L N F P D L R H N - - - - - - - - D E Y Q P L Q S S V D A K L E A I C Q
gm034828_Glyma1    F D T A E E A A L A Y D K A A Y R L R G D L A R L N F P N L K - - G S C P G - - - E E Y K P M Q A A V D A K L D A I C A
gm014755_Glyma0    F D T A E E A A L A Y D K A A Y K L R G D F A R L N F P N L R H Q G S S V G G D F G E Y K P L H S A V D A K L Q A I C E
 
AT1G22190.1     N L A E T T Q K Q V R S T K - - K S S S R K R S S T V A V K L P E E D Y S S A G S S P L L T E S Y G S G G S S S P L S E
gm034828_Glyma1    N L A E - M Q K Q G K N E K G A R S G K K S K Q G P N L E A K P E P E A S G S G A A A L S P E S E G S - A D S S A L S D
gm014755_Glyma0    G L A E - L Q K Q G K T E K P P R K - S R S K L A E K V V S D K E N N N S C K V E A A - S W S S E G - - - - S S P L S D
 
AT1G22190.1     L T F G D T E E E I Q P P W N E N A - - - - L E K Y P S Y E I D W D S I L Q C S S L V N
gm034828_Glyma1    L T F - D V T E - - - P Q W E D A S A H F N L Q K F P S Y E I D W D S L - - - - - - - -
gm014755_Glyma0    L T F A D V S E - - - A Q W E G D S D N Y N L Q K Y P S Y E I D W D S L - - - - - - - -
 
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