fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G22490.1 ITSLQSLRLTLLHLNV at 251/304 in AT1G22490.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009469 not found in 324aa AT1G72210.1 not_not 0.424418604 III
Gm040188 not found in 324aa AT1G72210.1 not_not 0.410852713 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G22490.1     MPLEAVVYPQDPFGYLSNCKDFMFHDLYS--------------QEEFVAQDTKNNIDKLG
gm009469_Glyma0 MALEAVVFPQDPFTYGC-DKDY----LYSLVEHNYGNFQAAEEEKVLLGII-NNNIEHNF
gm040188_Glyma1 MALEAVVFPQDPFTYGCNNKDF----LYSLVGGGGGS-------QTHVGIINNNNIDHTL
                *.*****:***** * .  **:    ***               :  :.   :***::  

AT1G22490.1     HEQ------SFVEQGKEDDHQWRDYHQYPLLIPSLGEELGLTAIDVESH--------PPP
gm009469_Glyma0 HANWDSSSTSMLQNVKE--QQW-DSHSSP------------EACTVDQSMTTAPFPPPPP
gm040188_Glyma1 HANWDSSSPSVLQNVKD---QW-DSHSSP------------EACTVDQSL---PAVFPPP
                * :      *.::: *:   ** * *. *             *  *:.         ***

AT1G22490.1     QH----------RRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSS
gm009469_Glyma0 SSSVEATVTATSRRKRRRTKSAKNTEEIENQRRTHIAVERNRRKQMNEYLAVLRSLMPSS
gm040188_Glyma1 SSSAEA--AAMGRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPS
                .           *******:..**.******* *************************.*

AT1G22490.1     YAQRGDQASIVGGAINYVKELEHILQSMEPKRTRTHDPK----GDKTSTSSLVGPFTDFF
gm009469_Glyma0 YVQRGDQASIIGGAINFVKELEQLLQSMEGQK-RTNQAQENVVGLNGSTTT---PFAEFF
gm040188_Glyma1 YVQRGDQASIIGGAINFVKELEQLLQCMKGQK-RTKEG-----GF--SDSS---PFAEFF
                *.********:*****:*****::**.*: :: **::      *   * ::   **::**

AT1G22490.1     SFPQYSTKSSSDVPESSS------------------SPAEIEVTVAESHANIKIMTKKKP
gm009469_Glyma0 TFPQYTTRGRTMAQEQKQ-----------------WAVADIEVTMVDSHANLKVLSKKQP
gm040188_Glyma1 MFPQYSTRATQSSSSSSRGYPGTCEANNNIARNHSWAVADIEVTLVDGHANMKILSKKRP
                 ****:*:.     ...                   : *:****:.:.***:*:::**:*

AT1G22490.1     RQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATALNQTIRRI
gm009469_Glyma0 GQLMKIVVGLQSLMLSILHLNVSTLDDMVLYSISVKVEDGCRLNTVDEIAAAVNQLLRTI
gm040188_Glyma1 GLLLKMVVGLQSLGLSILHLNVTTVDDMVLTSVSVKVEEGCQLNTVDEIAAAVHQLSRTV
                  *:*::..**** *::*****:*:.: :* *:**:**:*.:*****:**:*::*  * :

AT1G22490.1     QEET---
gm009469_Glyma0 Q-EVTFS
gm040188_Glyma1 QEEAVFS
                * *.
BoxShade v3.31 C (beta, 970507) Output
AT1G22490.1     M P L E A V V Y P Q D P F G Y L S N C K D F M F H D L Y S - - - - - - - - - - - - - - Q E E F V A Q D T K N N I D K L G
gm009469_Glyma0    M A L E A V V F P Q D P F T Y G C - D K D Y - - - - L Y S L V E H N Y G N F Q A A E E E K V L L G I I - N N N I E H N F
gm040188_Glyma1    M A L E A V V F P Q D P F T Y G C N N K D F - - - - L Y S L V G G G G G S - - - - - - - Q T H V G I I N N N N I D H T L
 
AT1G22490.1     H E Q - - - - - - S F V E Q G K E D D H Q W R D Y H Q Y P L L I P S L G E E L G L T A I D V E S H - - - - - - - - P P P
gm009469_Glyma0    H A N W D S S S T S M L Q N V K E - - Q Q W - D S H S S P - - - - - - - - - - - - E A C T V D Q S M T T A P F P P P P P
gm040188_Glyma1    H A N W D S S S P S V L Q N V K D - - - Q W - D S H S S P - - - - - - - - - - - - E A C T V D Q S L - - - P A V F P P P
 
AT1G22490.1     Q H - - - - - - - - - - R R K R R R T R N C K N K E E I E N Q R M T H I A V E R N R R K Q M N E Y L A V L R S L M P S S
gm009469_Glyma0    S S S V E A T V T A T S R R K R R R T K S A K N T E E I E N Q R R T H I A V E R N R R K Q M N E Y L A V L R S L M P S S
gm040188_Glyma1    S S S A E A - - A A M G R R K R R R T K S A K N K E E I E N Q R M T H I A V E R N R R K Q M N E Y L A V L R S L M P P S
 
AT1G22490.1     Y A Q R G D Q A S I V G G A I N Y V K E L E H I L Q S M E P K R T R T H D P K - - - - G D K T S T S S L V G P F T D F F
gm009469_Glyma0    Y V Q R G D Q A S I I G G A I N F V K E L E Q L L Q S M E G Q K - R T N Q A Q E N V V G L N G S T T T - - - P F A E F F
gm040188_Glyma1    Y V Q R G D Q A S I I G G A I N F V K E L E Q L L Q C M K G Q K - R T K E G - - - - - G F - - S D S S - - - P F A E F F
 
AT1G22490.1     S F P Q Y S T K S S S D V P E S S S - - - - - - - - - - - - - - - - - - S P A E I E V T V A E S H A N I K I M T K K K P
gm009469_Glyma0    T F P Q Y T T R G R T M A Q E Q K Q - - - - - - - - - - - - - - - - - W A V A D I E V T M V D S H A N L K V L S K K Q P
gm040188_Glyma1    M F P Q Y S T R A T Q S S S S S S R G Y P G T C E A N N N I A R N H S W A V A D I E V T L V D G H A N M K I L S K K R P
 
AT1G22490.1     R Q L L K L I T S L Q S L R L T L L H L N V T T L H N S I L Y S I S V R V E E G S Q L N T V D D I A T A L N Q T I R R I
gm009469_Glyma0    G Q L M K I V V G L Q S L M L S I L H L N V S T L D D M V L Y S I S V K V E D G C R L N T V D E I A A A V N Q L L R T I
gm040188_Glyma1    G L L L K M V V G L Q S L G L S I L H L N V T T V D D M V L T S V S V K V E E G C Q L N T V D E I A A A V H Q L S R T V
 
AT1G22490.1     Q E E T - - -
gm009469_Glyma0    Q - E V T F S
gm040188_Glyma1    Q E E A V F S
 
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