fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G22490.1 ITSLQSLRLTLLHLNV at 251/304 in AT1G22490.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014690 not found in 334aa AT1G72210.1 1st_not 0.432170542 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G22490.1     MPLEAVVYPQDPFGYLSNCKDFMFHDLYSQEEF----VAQDTK-------NNIDKLGH--
gm014690_Glyma0 MALEAVVFPQDPFAYGCN-KDYLYSLVGATPNYGNFQAAEEEKVLLGIINNNIE---HNL
                *.*****:*****.* .* **:::  : :  ::    .*:: *       ***:   *  

AT1G22490.1     -------EQSFVEQGKEDDHQWRDYHQYPLLIPSLGEELGLTAIDVESHPPPQ-------
gm014690_Glyma0 YANWDSSSTSMLQNVKE--QQW-DSHSSP---EACTVEQSVTTPSFPPPPPPSSSVEATV
                       . *:::: **  :** * *. *    :   * .:*: .. . ***.       

AT1G22490.1     ---HRRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQA
gm014690_Glyma0 TTTSRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYVQRGDQA
                    *******:..***************************************.******

AT1G22490.1     SIVGGAINYVKELEHILQSMEPKRTRTHDPKG-----DKTSTSSLVGPFTDFFSFPQYST
gm014690_Glyma0 SIIGGAINFVKELEQLLQSMEGQK-RTNQGKENVVGLNGTSRTTTTTPFAEFFAFPQYTT
                **:*****:*****::***** :: **:: *      : ** :: . **::**:****:*

AT1G22490.1     KSSS----DVPESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLN
gm014690_Glyma0 RGTTMAQNNQEQKQWAVADIEVTMVDNHANLKVLSKKQPGQIMKIVVGLQSLKLSILHLN
                :.::    :  :.. : *:****:.:.***:*:::**:* *::*::..****:*::****

AT1G22490.1     VTTLHNSILYSISVRVEEGSQLNTVDDIATALNQTIRRIQEET--
gm014690_Glyma0 VSTLDDMVLYSVSVKVEDGCLLNTVDEIAAAVNQLLRTIQEVTFS
                *:**.: :***:**:**:*. *****:**:*:** :* *** *
BoxShade v3.31 C (beta, 970507) Output
AT1G22490.1     M P L E A V V Y P Q D P F G Y L S N C K D F M F H D L Y S Q E E F - - - - V A Q D T K - - - - - - - N N I D K L G H - -
gm014690_Glyma0    M A L E A V V F P Q D P F A Y G C N - K D Y L Y S L V G A T P N Y G N F Q A A E E E K V L L G I I N N N I E - - - H N L
 
AT1G22490.1     - - - - - - - E Q S F V E Q G K E D D H Q W R D Y H Q Y P L L I P S L G E E L G L T A I D V E S H P P P Q - - - - - - -
gm014690_Glyma0    Y A N W D S S S T S M L Q N V K E - - Q Q W - D S H S S P - - - E A C T V E Q S V T T P S F P P P P P P S S S V E A T V
 
AT1G22490.1     - - - H R R K R R R T R N C K N K E E I E N Q R M T H I A V E R N R R K Q M N E Y L A V L R S L M P S S Y A Q R G D Q A
gm014690_Glyma0    T T T S R R K R R R T K S A K N K E E I E N Q R M T H I A V E R N R R K Q M N E Y L A V L R S L M P S S Y V Q R G D Q A
 
AT1G22490.1     S I V G G A I N Y V K E L E H I L Q S M E P K R T R T H D P K G - - - - - D K T S T S S L V G P F T D F F S F P Q Y S T
gm014690_Glyma0    S I I G G A I N F V K E L E Q L L Q S M E G Q K - R T N Q G K E N V V G L N G T S R T T T T T P F A E F F A F P Q Y T T
 
AT1G22490.1     K S S S - - - - D V P E S S S S P A E I E V T V A E S H A N I K I M T K K K P R Q L L K L I T S L Q S L R L T L L H L N
gm014690_Glyma0    R G T T M A Q N N Q E Q K Q W A V A D I E V T M V D N H A N L K V L S K K Q P G Q I M K I V V G L Q S L K L S I L H L N
 
AT1G22490.1     V T T L H N S I L Y S I S V R V E E G S Q L N T V D D I A T A L N Q T I R R I Q E E T - -
gm014690_Glyma0    V S T L D D M V L Y S V S V K V E D G C L L N T V D E I A A A V N Q L L R T I Q E V T F S
 
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