fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G22490.1 ITSLQSLRLTLLHLNV at 251/304 in AT1G22490.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014690 not found in 334aa AT1G72210.1 1st_not 0.432170542 II
Gm009469 not found in 324aa AT1G72210.1 not_not 0.424418604 III
Gm040188 not found in 324aa AT1G72210.1 not_not 0.410852713 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G22490.1     MPLEAVVYPQDPFGYLSNCKDFMFHDLYSQEEF----VAQDT--------KNNIDKLGHE
gm009469_Glyma0 MALEAVVFPQDPFTYGC-DKDYLYSLV--EHNYGNFQAAEEEKVLLGII-NNNIEHNFHA
gm014690_Glyma0 MALEAVVFPQDPFAYGC-NKDYLYSLVGATPNYGNFQAAEEEKVLLGII-NNNIEHNLYA
gm040188_Glyma1 MALEAVVFPQDPFTYGCNNKDFLYSLVG---------GGGGSQTHVGIINNNNIDHTLHA
                *.*****:***** * .  **:::  :           .           :***::  : 

AT1G22490.1     Q------SFVEQGKEDDHQWRDYHQYPLLIPSLGEELGLTAIDVESH-----------PP
gm009469_Glyma0 NWDSSSTSMLQNVKE--QQW-DSHSSP------------EACTVDQSMTTAPF-PP--PP
gm014690_Glyma0 NWDSSSTSMLQNVKE--QQW-DSHSSP------------EACTVEQSVTTPSFPPP--PP
gm040188_Glyma1 NWDSSSPSVLQNVKD---QW-DSHSSP------------EACTVDQSL------PAVFPP
                :      *.::: *:   ** * *. *             *  *:.            **

AT1G22490.1     PQH----------RRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPS
gm009469_Glyma0 PSSSVEATVTATSRRKRRRTKSAKNTEEIENQRRTHIAVERNRRKQMNEYLAVLRSLMPS
gm014690_Glyma0 PSSSVEATVTTTSRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPS
gm040188_Glyma1 PSSSAEA--AAMGRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPP
                *.           *******:..**.******* *************************.

AT1G22490.1     SYAQRGDQASIVGGAINYVKELEHILQSMEPKRTRTHDPK-------G-DKTSTSSLVGP
gm009469_Glyma0 SYVQRGDQASIIGGAINFVKELEQLLQSMEGQK-RTNQAQENVVGLNG----STTT---P
gm014690_Glyma0 SYVQRGDQASIIGGAINFVKELEQLLQSMEGQK-RTNQGKENVVGLNGTSRTTTTT---P
gm040188_Glyma1 SYVQRGDQASIIGGAINFVKELEQLLQCMKGQK-RTKEG--------G---FSDSS---P
                **.********:*****:*****::**.*: :: **::         *    : ::   *

AT1G22490.1     FTDFFSFPQYSTK-----SSSD-------------VPESSSSPAEIEVTVAESHANIKIM
gm009469_Glyma0 FAEFFTFPQYTTR-------------GRTMA----QEQKQWAVADIEVTMVDSHANLKVL
gm014690_Glyma0 FAEFFAFPQYTTR-------------GTTMAQNN-QEQKQWAVADIEVTMVDNHANLKVL
gm040188_Glyma1 FAEFFMFPQYSTRATQSSSSSSRGYPGTCEANNNIARNHSWAVADIEVTLVDGHANMKIL
                *::** ****:*:                        : . : *:****:.:.***:*::

AT1G22490.1     TKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATALNQ
gm009469_Glyma0 SKKQPGQLMKIVVGLQSLMLSILHLNVSTLDDMVLYSISVKVEDGCRLNTVDEIAAAVNQ
gm014690_Glyma0 SKKQPGQIMKIVVGLQSLKLSILHLNVSTLDDMVLYSVSVKVEDGCLLNTVDEIAAAVNQ
gm040188_Glyma1 SKKRPGLLLKMVVGLQSLGLSILHLNVTTVDDMVLTSVSVKVEEGCQLNTVDEIAAAVHQ
                :**:*  ::*::..**** *::*****:*:.: :* *:**:**:*. *****:**:*::*

AT1G22490.1     TIRRIQEET---
gm009469_Glyma0 LLRTIQ-EVTFS
gm014690_Glyma0 LLRTIQ-EVTFS
gm040188_Glyma1 LSRTVQEEAVFS
                  * :* *.
BoxShade v3.31 C (beta, 970507) Output
AT1G22490.1     M P L E A V V Y P Q D P F G Y L S N C K D F M F H D L Y S Q E E F - - - - V A Q D T - - - - - - - - K N N I D K L G H E
gm009469_Glyma0    M A L E A V V F P Q D P F T Y G C - D K D Y L Y S L V - - E H N Y G N F Q A A E E E K V L L G I I - N N N I E H N F H A
gm014690_Glyma0    M A L E A V V F P Q D P F A Y G C - N K D Y L Y S L V G A T P N Y G N F Q A A E E E K V L L G I I - N N N I E H N L Y A
gm040188_Glyma1    M A L E A V V F P Q D P F T Y G C N N K D F L Y S L V G - - - - - - - - - G G G G S Q T H V G I I N N N N I D H T L H A
 
AT1G22490.1     Q - - - - - - S F V E Q G K E D D H Q W R D Y H Q Y P L L I P S L G E E L G L T A I D V E S H - - - - - - - - - - - P P
gm009469_Glyma0    N W D S S S T S M L Q N V K E - - Q Q W - D S H S S P - - - - - - - - - - - - E A C T V D Q S M T T A P F - P P - - P P
gm014690_Glyma0    N W D S S S T S M L Q N V K E - - Q Q W - D S H S S P - - - - - - - - - - - - E A C T V E Q S V T T P S F P P P - - P P
gm040188_Glyma1    N W D S S S P S V L Q N V K D - - - Q W - D S H S S P - - - - - - - - - - - - E A C T V D Q S L - - - - - - P A V F P P
 
AT1G22490.1     P Q H - - - - - - - - - - R R K R R R T R N C K N K E E I E N Q R M T H I A V E R N R R K Q M N E Y L A V L R S L M P S
gm009469_Glyma0    P S S S V E A T V T A T S R R K R R R T K S A K N T E E I E N Q R R T H I A V E R N R R K Q M N E Y L A V L R S L M P S
gm014690_Glyma0    P S S S V E A T V T T T S R R K R R R T K S A K N K E E I E N Q R M T H I A V E R N R R K Q M N E Y L A V L R S L M P S
gm040188_Glyma1    P S S S A E A - - A A M G R R K R R R T K S A K N K E E I E N Q R M T H I A V E R N R R K Q M N E Y L A V L R S L M P P
 
AT1G22490.1     S Y A Q R G D Q A S I V G G A I N Y V K E L E H I L Q S M E P K R T R T H D P K - - - - - - - G - D K T S T S S L V G P
gm009469_Glyma0    S Y V Q R G D Q A S I I G G A I N F V K E L E Q L L Q S M E G Q K - R T N Q A Q E N V V G L N G - - - - S T T T - - - P
gm014690_Glyma0    S Y V Q R G D Q A S I I G G A I N F V K E L E Q L L Q S M E G Q K - R T N Q G K E N V V G L N G T S R T T T T T - - - P
gm040188_Glyma1    S Y V Q R G D Q A S I I G G A I N F V K E L E Q L L Q C M K G Q K - R T K E G - - - - - - - - G - - - F S D S S - - - P
 
AT1G22490.1     F T D F F S F P Q Y S T K - - - - - S S S D - - - - - - - - - - - - - V P E S S S S P A E I E V T V A E S H A N I K I M
gm009469_Glyma0    F A E F F T F P Q Y T T R - - - - - - - - - - - - - G R T M A - - - - Q E Q K Q W A V A D I E V T M V D S H A N L K V L
gm014690_Glyma0    F A E F F A F P Q Y T T R - - - - - - - - - - - - - G T T M A Q N N - Q E Q K Q W A V A D I E V T M V D N H A N L K V L
gm040188_Glyma1    F A E F F M F P Q Y S T R A T Q S S S S S S R G Y P G T C E A N N N I A R N H S W A V A D I E V T L V D G H A N M K I L
 
AT1G22490.1     T K K K P R Q L L K L I T S L Q S L R L T L L H L N V T T L H N S I L Y S I S V R V E E G S Q L N T V D D I A T A L N Q
gm009469_Glyma0    S K K Q P G Q L M K I V V G L Q S L M L S I L H L N V S T L D D M V L Y S I S V K V E D G C R L N T V D E I A A A V N Q
gm014690_Glyma0    S K K Q P G Q I M K I V V G L Q S L K L S I L H L N V S T L D D M V L Y S V S V K V E D G C L L N T V D E I A A A V N Q
gm040188_Glyma1    S K K R P G L L L K M V V G L Q S L G L S I L H L N V T T V D D M V L T S V S V K V E E G C Q L N T V D E I A A A V H Q
 
AT1G22490.1     T I R R I Q E E T - - -
gm009469_Glyma0    L L R T I Q - E V T F S
gm014690_Glyma0    L L R T I Q - E V T F S
gm040188_Glyma1    L S R T V Q E E A V F S
 
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