fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G22640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030520 LERCPDLNLELTISPP in 170/246 AT4G34990.1 1st_not 0.491682070 II
Gm019076 PCALPDLNLDLSITNP in 186/255 AT1G22640.1 not_1st 0.430683918 II
Gm053532 SCALPDLNLDLSICEK in 160/218 AT1G22640.1 not_1st 0.421441774 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G22640.1     MGRSPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNY
gm030520_Glyma1 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
gm053532_Glyma2 -MRKPSCDIKELNKGAWSKQEDQKLVDYIKKHGEVCWRTLPQAAGLHRCGKSCRLRWINY
gm019076_Glyma0 -MRKPSCDIKDLNKGAWSKQEDQKLIDYIKKHGEVCWRTLPQAAGLHRCGKSCRLRWINY
                  *.*.*:  . *****:*:**: *:.**: *** ***:**:**** **********:**

AT1G22640.1     LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSRG
gm030520_Glyma1 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG
gm053532_Glyma2 LRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRKKLISNG
gm019076_Glyma0 LRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLISKG
                **********:*:*::******:****:***************:*****:**::**:..*

AT1G22640.1     IDPNSHRLINESVVSPSSLQNDVV-ETIHLDFSGPVKPEPVREEIGMV--------NNCE
gm030520_Glyma1 IDPATHRPLNEAATAATV--------TTNISFG---KQE--QQETSSS--------NGSV
gm053532_Glyma2 IDPNNHRLNH---TIPSVYQNPPMSDD-----------------------------ISDA
gm019076_Glyma0 IDPNNHRLKH---TIPSSLQNSLMSDDSSKAFS---MKDTNKNETSKLPRVYNHVEVSDA
                *** .**  :   . .:                                        .  

AT1G22640.1     SSGTTSEK----DYGNEEDWVLNLELSV--------------GPSYRYESTRKVSVVDSA
gm030520_Glyma1 VKGSILERC--PD--------LNLELTI--------------SPPRQQQQTQK-------
gm053532_Glyma2 ASGEAESSCALPD--------LNLDLSICE---------KNLKPFHESKLSRKVP-FDSP
gm019076_Glyma0 ASGEAESPCALPD--------LNLDLSITNPSASQSISGNNVKPFHESNSSRKVQ-FDSP
                 .*   .     *        ***:*::               *  . : ::*       

AT1G22640.1     ESTRRWGSELF--GAHESDAVCLCCRIGLFR-NESCRNCRVSDVRTH-------------
gm030520_Glyma1 -------------------NLCFVCSLGLHN-SKDC-SCNVSNAVTVNNTTPSSAAAAAY
gm053532_Glyma2 STL------LLPQLARKNVGLCFVTTLQWHTIGKH-------------------------
gm019076_Glyma0 STL------LL--FHNSSYVEAQVCSIRLNALKRNCRNI---------------------
                                     .    :      .                          

AT1G22640.1     -------------------
gm030520_Glyma1 DFLGMKTSGVWDCTRLEMK
gm053532_Glyma2 -------------------
gm019076_Glyma0 -------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G22640.1     M G R S P C C E K A H M N K G A W T K E E D Q L L V D Y I R K H G E G C W R S L P R A A G L Q R C G K S C R L R W M N Y
gm030520_Glyma1    M G R S P C C E K A H T N K G A W T K E E D D R L I S Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
gm053532_Glyma2    - M R K P S C D I K E L N K G A W S K Q E D Q K L V D Y I K K H G E V C W R T L P Q A A G L H R C G K S C R L R W I N Y
gm019076_Glyma0    - M R K P S C D I K D L N K G A W S K Q E D Q K L I D Y I K K H G E V C W R T L P Q A A G L H R C G K S C R L R W I N Y
 
AT1G22640.1     L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I K R K L L S R G
gm030520_Glyma1    L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L N R G
gm053532_Glyma2    L R P D L K R G N F A E D E E D L I I K L H A L L G N R W S L I A G R L P G R T D N E V K N Y W N S H I R K K L I S N G
gm019076_Glyma0    L R P D L K R G N F A E D E E D L I I K L H A L L G N R W S L I A G R L P G R T D N E V K N Y W N S H I R R K L I S K G
 
AT1G22640.1     I D P N S H R L I N E S V V S P S S L Q N D V V - E T I H L D F S G P V K P E P V R E E I G M V - - - - - - - - N N C E
gm030520_Glyma1    I D P A T H R P L N E A A T A A T V - - - - - - - - T T N I S F G - - - K Q E - - Q Q E T S S S - - - - - - - - N G S V
gm053532_Glyma2    I D P N N H R L N H - - - T I P S V Y Q N P P M S D D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I S D A
gm019076_Glyma0    I D P N N H R L K H - - - T I P S S L Q N S L M S D D S S K A F S - - - M K D T N K N E T S K L P R V Y N H V E V S D A
 
AT1G22640.1     S S G T T S E K - - - - D Y G N E E D W V L N L E L S V - - - - - - - - - - - - - - G P S Y R Y E S T R K V S V V D S A
gm030520_Glyma1    V K G S I L E R C - - P D - - - - - - - - L N L E L T I - - - - - - - - - - - - - - S P P R Q Q Q Q T Q K - - - - - - -
gm053532_Glyma2    A S G E A E S S C A L P D - - - - - - - - L N L D L S I C E - - - - - - - - - K N L K P F H E S K L S R K V P - F D S P
gm019076_Glyma0    A S G E A E S P C A L P D - - - - - - - - L N L D L S I T N P S A S Q S I S G N N V K P F H E S N S S R K V Q - F D S P
 
AT1G22640.1     E S T R R W G S E L F - - G A H E S D A V C L C C R I G L F R - N E S C R N C R V S D V R T H - - - - - - - - - - - - -
gm030520_Glyma1    - - - - - - - - - - - - - - - - - - - N L C F V C S L G L H N - S K D C - S C N V S N A V T V N N T T P S S A A A A A Y
gm053532_Glyma2    S T L - - - - - - L L P Q L A R K N V G L C F V T T L Q W H T I G K H - - - - - - - - - - - - - - - - - - - - - - - - -
gm019076_Glyma0    S T L - - - - - - L L - - F H N S S Y V E A Q V C S I R L N A L K R N C R N I - - - - - - - - - - - - - - - - - - - - -
 
AT1G22640.1     - - - - - - - - - - - - - - - - - - -
gm030520_Glyma1    D F L G M K T S G V W D C T R L E M K
gm053532_Glyma2    - - - - - - - - - - - - - - - - - - -
gm019076_Glyma0    - - - - - - - - - - - - - - - - - - -
 
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