fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G22810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029484 not found in 179aa AT1G71520.1 not_not 0.404682274 III
Pt015463 not found in 168aa AT1G71520.1 not_not 0.454849498 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G22810.1     --------MDYRESTGESQSKYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVA
pt015463_POPTR_ MSGSSSSRTDQESGASAARKKFKGVRRRKWGKWVSEIRIPGKQDRLWLGSYSTPEAAAVA
gm029484_Glyma1 -----MSRSSAMHGITSTNNKLKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVA
                         .   .   :..* **:*************:**.::*****:::*.*.****

AT1G22810.1     HDVAFFCLHQPDSLESLNFPHLLNPSLVS--RTSPRSIQQAASNAGMAIDAGIV------
pt015463_POPTR_ HDIASYCLRGPSSIESLNFPLMLPASVRE--DMSPKSIQKAASDAGMAIDAQMILNRVPE
gm029484_Glyma1 HDVAVYCLSRPSSLDKLNFPETLSSYSVQLRDMSPRSVQKVASDVGMDVDARNI------
                **:* :**  *.*::.****  * .   .    **:*:*:.**:.** :**  :      

AT1G22810.1     -------HSTSVNSG-----C------------------G----------DTTTYYENG-
pt015463_POPTR_ NEVKFWTASGGVNHGLEIELCEP--------------AGG----------DHGGNWHGN-
gm029484_Glyma1 --VAGKTSTVGAETN-----CESDERTSTASVCNVVGEGGADHSDVFWWDDDGGSWHGSG
                        : ..: .     *                  *          *    :... 

AT1G22810.1     --ADQVEPLNISVYDYLGGHDHV
pt015463_POPTR_ --NTGMREGDISIEDYL------
gm029484_Glyma1 GDSTERDALSISIEDYL------
                         .**: ***
BoxShade v3.31 C (beta, 970507) Output
AT1G22810.1     - - - - - - - - M D Y R E S T G E S Q S K Y K G I R R R K W G K W V S E I R V P G T R D R L W L G S F S T A E G A A V A
pt015463_POPTR_    M S G S S S S R T D Q E S G A S A A R K K F K G V R R R K W G K W V S E I R I P G K Q D R L W L G S Y S T P E A A A V A
gm029484_Glyma1    - - - - - M S R S S A M H G I T S T N N K L K G V R R R K W G K W V S E I R V P G T Q E R L W L G T Y A T P E A A A V A
 
AT1G22810.1     H D V A F F C L H Q P D S L E S L N F P H L L N P S L V S - - R T S P R S I Q Q A A S N A G M A I D A G I V - - - - - -
pt015463_POPTR_    H D I A S Y C L R G P S S I E S L N F P L M L P A S V R E - - D M S P K S I Q K A A S D A G M A I D A Q M I L N R V P E
gm029484_Glyma1    H D V A V Y C L S R P S S L D K L N F P E T L S S Y S V Q L R D M S P R S V Q K V A S D V G M D V D A R N I - - - - - -
 
AT1G22810.1     - - - - - - - H S T S V N S G - - - - - C - - - - - - - - - - - - - - - - - - G - - - - - - - - - - D T T T Y Y E N G -
pt015463_POPTR_    N E V K F W T A S G G V N H G L E I E L C E P - - - - - - - - - - - - - - A G G - - - - - - - - - - D H G G N W H G N -
gm029484_Glyma1    - - V A G K T S T V G A E T N - - - - - C E S D E R T S T A S V C N V V G E G G A D H S D V F W W D D D G G S W H G S G
 
AT1G22810.1     - - A D Q V E P L N I S V Y D Y L G G H D H V
pt015463_POPTR_    - - N T G M R E G D I S I E D Y L - - - - - -
gm029484_Glyma1    G D S T E R D A L S I S I E D Y L - - - - - -
 
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