fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G22810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013342 not found in 185aa AT1G22810.1 1st_1st 0.478260869 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G22810.1     ---------------MDYRESTGESQSKYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFST
pt013342_POPTR_ MSGSSGGSSSSSSRIIDQESGASESQRKFKGARRRKWGKWVSEIRIPGKQERLWLGSYST
                               :* ...:.*** *:** *************:**.::******:**

AT1G22810.1     AEGAAVAHDVAFFCLHQPDSLESLNFPHLLNPSLVSRTSPRSIQQAASNAGMAIDAGIVH
pt013342_POPTR_ PEAAAVAHDIASYCLRGPSSLESLNFPLMLPASVREDMSPKSIQKAASDAGMAIDAQMIL
                .*.******:* :**: *.******** :* .*: .  **:***:***:******* :: 

AT1G22810.1     STSVNS-------------------------GCGDTTTYYEN------GADQVEPLNISV
pt013342_POPTR_ NRSLQNEVKVGPENVAINHGPQTQLWEPAAGGGGDSSNRCENWHENNIGTRVGDDLNISI
                . *::.                         * **::.  **      *:   : ****:

AT1G22810.1     YDYLGGHDHV
pt013342_POPTR_ EDYLM-----
                 ***
BoxShade v3.31 C (beta, 970507) Output
AT1G22810.1     - - - - - - - - - - - - - - - M D Y R E S T G E S Q S K Y K G I R R R K W G K W V S E I R V P G T R D R L W L G S F S T
pt013342_POPTR_    M S G S S G G S S S S S S R I I D Q E S G A S E S Q R K F K G A R R R K W G K W V S E I R I P G K Q E R L W L G S Y S T
 
AT1G22810.1     A E G A A V A H D V A F F C L H Q P D S L E S L N F P H L L N P S L V S R T S P R S I Q Q A A S N A G M A I D A G I V H
pt013342_POPTR_    P E A A A V A H D I A S Y C L R G P S S L E S L N F P L M L P A S V R E D M S P K S I Q K A A S D A G M A I D A Q M I L
 
AT1G22810.1     S T S V N S - - - - - - - - - - - - - - - - - - - - - - - - - G C G D T T T Y Y E N - - - - - - G A D Q V E P L N I S V
pt013342_POPTR_    N R S L Q N E V K V G P E N V A I N H G P Q T Q L W E P A A G G G G D S S N R C E N W H E N N I G T R V G D D L N I S I
 
AT1G22810.1     Y D Y L G G H D H V
pt013342_POPTR_    E D Y L M - - - - -
 
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