fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G22810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002394 not found in 152aa AT1G71520.1 1st_not 0.414715719 II
Gm029484 not found in 179aa AT1G71520.1 not_not 0.404682274 III
Pt013342 not found in 185aa AT1G22810.1 1st_1st 0.478260869 Ia
Pt015463 not found in 168aa AT1G71520.1 not_not 0.454849498 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G22810.1     ---------------MDYRESTGESQSKYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFST
gm002394_Glyma0 --------MRSS-----------SSAKKLKGVRRRKWGKWVSEIRVPGTQGRLWLGTYAT
pt013342_POPTR_ MSGSSGGSSSSSSRIIDQESGASESQRKFKGARRRKWGKWVSEIRIPGKQERLWLGSYST
pt015463_POPTR_ MSG------SSSSR-TDQESGASAARKKFKGVRRRKWGKWVSEIRIPGKQDRLWLGSYST
gm029484_Glyma1 -------MSRSSAM-----HGITSTNNKLKGVRRRKWGKWVSEIRVPGTQERLWLGTYAT
                                        :  * ** *************:**.: *****:::*

AT1G22810.1     AEGAAVAHDVAFFCLHQPDSLESLNFPHLLNPSLVS--RTSPRSIQQAASNAGMAIDAGI
gm002394_Glyma0 QEAAAVAHDVAVYCLRRPSSLDKLNFPETLSSFSLQLRDMSPRSVQKVASDIGMDVDARN
pt013342_POPTR_ PEAAAVAHDIASYCLRGPSSLESLNFPLMLPASVRE--DMSPKSIQKAASDAGMAIDAQM
pt015463_POPTR_ PEAAAVAHDIASYCLRGPSSIESLNFPLMLPASVRE--DMSPKSIQKAASDAGMAIDAQM
gm029484_Glyma1 PEAAAVAHDVAVYCLSRPSSLDKLNFPETLSSYSVQLRDMSPRSVQKVASDVGMDVDARN
                 *.******:* :**  *.*::.****  * .   .    **:*:*:.**: ** :**  

AT1G22810.1     V----------------------HS-------TSVNSGC------------GDTT----T
gm002394_Glyma0 ILAG----------------------------GADEHSD-VFRWDAVGNEDGG------S
pt013342_POPTR_ ILNR---------SLQNEVKVGPEN-------VAINHGPQTQLWEPAAGGGGDSSNRCEN
pt015463_POPTR_ ILNR---------VPENEVKFWTAS-------GGVNHGLEIELCEPAGGDHGG------N
gm029484_Glyma1 IVAGKTSTVGAETNCESDERTSTASVCNVVGEGGADHSD-VFWWD----DDGG------S
                :                                . : .             *.      .

AT1G22810.1     YYEN--GADQVE-PLNISVYDYLGGHDHV
gm002394_Glyma0 WHGSGGDCKERDQALSISIEDYLELS---
pt013342_POPTR_ WHENNIGTRVGD-DLNISIEDYLM-----
pt015463_POPTR_ WHGNNTGMREGD----ISIEDYL------
gm029484_Glyma1 WHGSGGDSTERD-ALSISIEDYL------
                :: .  .    :    **: ***
BoxShade v3.31 C (beta, 970507) Output
AT1G22810.1     - - - - - - - - - - - - - - - M D Y R E S T G E S Q S K Y K G I R R R K W G K W V S E I R V P G T R D R L W L G S F S T
gm002394_Glyma0    - - - - - - - - M R S S - - - - - - - - - - - S S A K K L K G V R R R K W G K W V S E I R V P G T Q G R L W L G T Y A T
pt013342_POPTR_    M S G S S G G S S S S S S R I I D Q E S G A S E S Q R K F K G A R R R K W G K W V S E I R I P G K Q E R L W L G S Y S T
pt015463_POPTR_    M S G - - - - - - S S S S R - T D Q E S G A S A A R K K F K G V R R R K W G K W V S E I R I P G K Q D R L W L G S Y S T
gm029484_Glyma1    - - - - - - - M S R S S A M - - - - - H G I T S T N N K L K G V R R R K W G K W V S E I R V P G T Q E R L W L G T Y A T
 
AT1G22810.1     A E G A A V A H D V A F F C L H Q P D S L E S L N F P H L L N P S L V S - - R T S P R S I Q Q A A S N A G M A I D A G I
gm002394_Glyma0    Q E A A A V A H D V A V Y C L R R P S S L D K L N F P E T L S S F S L Q L R D M S P R S V Q K V A S D I G M D V D A R N
pt013342_POPTR_    P E A A A V A H D I A S Y C L R G P S S L E S L N F P L M L P A S V R E - - D M S P K S I Q K A A S D A G M A I D A Q M
pt015463_POPTR_    P E A A A V A H D I A S Y C L R G P S S I E S L N F P L M L P A S V R E - - D M S P K S I Q K A A S D A G M A I D A Q M
gm029484_Glyma1    P E A A A V A H D V A V Y C L S R P S S L D K L N F P E T L S S Y S V Q L R D M S P R S V Q K V A S D V G M D V D A R N
 
AT1G22810.1     V - - - - - - - - - - - - - - - - - - - - - - H S - - - - - - - T S V N S G C - - - - - - - - - - - - G D T T - - - - T
gm002394_Glyma0    I L A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - G A D E H S D - V F R W D A V G N E D G G - - - - - - S
pt013342_POPTR_    I L N R - - - - - - - - - S L Q N E V K V G P E N - - - - - - - V A I N H G P Q T Q L W E P A A G G G G D S S N R C E N
pt015463_POPTR_    I L N R - - - - - - - - - V P E N E V K F W T A S - - - - - - - G G V N H G L E I E L C E P A G G D H G G - - - - - - N
gm029484_Glyma1    I V A G K T S T V G A E T N C E S D E R T S T A S V C N V V G E G G A D H S D - V F W W D - - - - D D G G - - - - - - S
 
AT1G22810.1     Y Y E N - - G A D Q V E - P L N I S V Y D Y L G G H D H V
gm002394_Glyma0    W H G S G G D C K E R D Q A L S I S I E D Y L E L S - - -
pt013342_POPTR_    W H E N N I G T R V G D - D L N I S I E D Y L M - - - - -
pt015463_POPTR_    W H G N N T G M R E G D - - - - I S I E D Y L - - - - - -
gm029484_Glyma1    W H G S G G D S T E R D - A L S I S I E D Y L - - - - - -
 
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