fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G22810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015463 not found in 168aa AT1G71520.1 not_not 0.454849498 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G22810.1     --------MDYRESTGESQSKYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVA
pt015463_POPTR_ MSGSSSSRTDQESGASAARKKFKGVRRRKWGKWVSEIRIPGKQDRLWLGSYSTPEAAAVA
                         * ...:. ::.*:**:*************:**.:*******:**.*.****

AT1G22810.1     HDVAFFCLHQPDSLESLNFPHLLNPSLVSRTSPRSIQQAASNAGMAIDAGIV--------
pt015463_POPTR_ HDIASYCLRGPSSIESLNFPLMLPASVREDMSPKSIQKAASDAGMAIDAQMILNRVPENE
                **:* :**: *.*:****** :* .*: .  **:***:***:******* ::        

AT1G22810.1     -----HSTSVNSG-----C----GDTTTYYENGADQVEPLNISVYDYLGGHDHV
pt015463_POPTR_ VKFWTASGGVNHGLEIELCEPAGGDHGGNWHGNNTGMREGDISIEDYL------
                      * .** *     *    **    :...   :.  :**: ***
BoxShade v3.31 C (beta, 970507) Output
AT1G22810.1     - - - - - - - - M D Y R E S T G E S Q S K Y K G I R R R K W G K W V S E I R V P G T R D R L W L G S F S T A E G A A V A
pt015463_POPTR_    M S G S S S S R T D Q E S G A S A A R K K F K G V R R R K W G K W V S E I R I P G K Q D R L W L G S Y S T P E A A A V A
 
AT1G22810.1     H D V A F F C L H Q P D S L E S L N F P H L L N P S L V S R T S P R S I Q Q A A S N A G M A I D A G I V - - - - - - - -
pt015463_POPTR_    H D I A S Y C L R G P S S I E S L N F P L M L P A S V R E D M S P K S I Q K A A S D A G M A I D A Q M I L N R V P E N E
 
AT1G22810.1     - - - - - H S T S V N S G - - - - - C - - - - G D T T T Y Y E N G A D Q V E P L N I S V Y D Y L G G H D H V
pt015463_POPTR_    V K F W T A S G G V N H G L E I E L C E P A G G D H G G N W H G N N T G M R E G D I S I E D Y L - - - - - -
 
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