fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G22810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002394 not found in 152aa AT1G71520.1 1st_not 0.414715719 II
Gm029484 not found in 179aa AT1G71520.1 not_not 0.404682274 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G22810.1     MDYRES----TGESQSKYKGIRRRKWGKWVSEIRVPGTRDRLWLGSFSTAEGAAVAHDVA
gm002394_Glyma0 --MRSS------SSAKKLKGVRRRKWGKWVSEIRVPGTQGRLWLGTYATQEAAAVAHDVA
gm029484_Glyma1 -MSRSSAMHGITSTNNKLKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVA
                   *.*      .: .* **:*****************: *****:::* *.********

AT1G22810.1     FFCLHQPDSLESLNFPHLLNP-SLVSR-TSPRSIQQAASNAGMAIDA-GIVHS-------
gm002394_Glyma0 VYCLRRPSSLDKLNFPETLSSFSLQLRDMSPRSVQKVASDIGMDVDARNILAG-------
gm029484_Glyma1 VYCLSRPSSLDKLNFPETLSSYSVQLRDMSPRSVQKVASDVGMDVDARNIVAGKTSTVGA
                .:** :*.**:.****. *.. *:  *  ****:*:.**: ** :** .*: .       

AT1G22810.1     ---------TSVNSGC---------------------GDTTTYYENGADQVE---PLNIS
gm002394_Glyma0 ---------------------GADEHSDVFRWDAVGNEDGGSWHGSGGDCKERDQALSIS
gm029484_Glyma1 ETNCESDERTSTASVCNVVGEGGADHSDVFWWD----DDGGSWHGSGGDSTERD-ALSIS
                                                      *  ::: .*.*  *   .*.**

AT1G22810.1     VYDYLGGHDHV
gm002394_Glyma0 IEDYLELS---
gm029484_Glyma1 IEDYL------
                : ***
BoxShade v3.31 C (beta, 970507) Output
AT1G22810.1     M D Y R E S - - - - T G E S Q S K Y K G I R R R K W G K W V S E I R V P G T R D R L W L G S F S T A E G A A V A H D V A
gm002394_Glyma0    - - M R S S - - - - - - S S A K K L K G V R R R K W G K W V S E I R V P G T Q G R L W L G T Y A T Q E A A A V A H D V A
gm029484_Glyma1    - M S R S S A M H G I T S T N N K L K G V R R R K W G K W V S E I R V P G T Q E R L W L G T Y A T P E A A A V A H D V A
 
AT1G22810.1     F F C L H Q P D S L E S L N F P H L L N P - S L V S R - T S P R S I Q Q A A S N A G M A I D A - G I V H S - - - - - - -
gm002394_Glyma0    V Y C L R R P S S L D K L N F P E T L S S F S L Q L R D M S P R S V Q K V A S D I G M D V D A R N I L A G - - - - - - -
gm029484_Glyma1    V Y C L S R P S S L D K L N F P E T L S S Y S V Q L R D M S P R S V Q K V A S D V G M D V D A R N I V A G K T S T V G A
 
AT1G22810.1     - - - - - - - - - T S V N S G C - - - - - - - - - - - - - - - - - - - - - G D T T T Y Y E N G A D Q V E - - - P L N I S
gm002394_Glyma0    - - - - - - - - - - - - - - - - - - - - - G A D E H S D V F R W D A V G N E D G G S W H G S G G D C K E R D Q A L S I S
gm029484_Glyma1    E T N C E S D E R T S T A S V C N V V G E G G A D H S D V F W W D - - - - D D G G S W H G S G G D S T E R D - A L S I S
 
AT1G22810.1     V Y D Y L G G H D H V
gm002394_Glyma0    I E D Y L E L S - - -
gm029484_Glyma1    I E D Y L - - - - - -
 
0