fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G23420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000468 not found in 216aa AT1G23420.1 1st_1st 0.507726269 Ia
Pt035033 not found in 216aa AT1G23420.1 1st_1st 0.498896247 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G23420.1     MTKLPNMTTTLNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVN
gm000468_Glyma0 -------MSTLNHLFDLPEQICYVECGFCATILMVSVPSSSLSMVVTVKCGHCTSVLSVN
pt035033_POPTR_ -------MSTLNHLFDPPDQICYVQCGFCTTILLVSVPCSSSSTVVTVICGHCSSLLSVN
                        :******* * ***:*:****:***:**** :* * **** ****:*:****

AT1G23420.1     LMKASFIPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNED--
gm000468_Glyma0 MMKASFVPFHLLASLSHLEP--KESSSEQDA--------NKTLKRHNASMMTYSDCEE--
pt035033_POPTR_ LTKISFLPFNLLTSLSHDQE--QKELLSPDEVNA-----QKGLDTQSSFIAISSDNDEDI
                : * **:*::**:**** :   ::.    *         ::  .   : :   ** ::  

AT1G23420.1     EDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPP
gm000468_Glyma0 EDAIPMSNVVNKPPEKRQRTPSAYNCFIKEEIKRLKAENPDMAHREAFSTAAKNWANFPP
pt035033_POPTR_ DKVNPVNRVINKPPEKRQRAPSAYNCFIKEEIRRLKTENPNMAHKEAFSTAAKNWAHCPH
                :..  : .*:*********:************:***::**.***:**** ******: * 

AT1G23420.1     AHNKRAASDQCFCEEDNNAILPCNVFED---HEESNNGFRERKAQRHSIWGKSPFE
gm000468_Glyma0 TQCKE-DEESCSSQTDQHVDLDSQVDPNAVVNEEEGQGLRGRKVPKNSILERTPFE
pt035033_POPTR_ VHYKG-DGESIGLEEEN-----STWSSDAAEVNIESKGFHERKVPRHYMWAKTPFE
                .: *    :.   : ::     .    :    : ..:*:: **. :: :  ::***
BoxShade v3.31 C (beta, 970507) Output
AT1G23420.1     M T K L P N M T T T L N H L F D L P G Q I C H V Q C G F C T T I L L V S V P F T S L S M V V T V R C G H C T S L L S V N
gm000468_Glyma0    - - - - - - - M S T L N H L F D L P E Q I C Y V E C G F C A T I L M V S V P S S S L S M V V T V K C G H C T S V L S V N
pt035033_POPTR_    - - - - - - - M S T L N H L F D P P D Q I C Y V Q C G F C T T I L L V S V P C S S S S T V V T V I C G H C S S L L S V N
 
AT1G23420.1     L M K A S F I P L H L L A S L S H L D E T G K E E V A A T D G V E E E A W K V N Q E K E N S P T T L V S S S D N E D - -
gm000468_Glyma0    M M K A S F V P F H L L A S L S H L E P - - K E S S S E Q D A - - - - - - - - N K T L K R H N A S M M T Y S D C E E - -
pt035033_POPTR_    L T K I S F L P F N L L T S L S H D Q E - - Q K E L L S P D E V N A - - - - - Q K G L D T Q S S F I A I S S D N D E D I
 
AT1G23420.1     E D V S R V Y Q V V N K P P E K R Q R A P S A Y N C F I K E E I R R L K A Q N P S M A H K E A F S L A A K N W A H F P P
gm000468_Glyma0    E D A I P M S N V V N K P P E K R Q R T P S A Y N C F I K E E I K R L K A E N P D M A H R E A F S T A A K N W A N F P P
pt035033_POPTR_    D K V N P V N R V I N K P P E K R Q R A P S A Y N C F I K E E I R R L K T E N P N M A H K E A F S T A A K N W A H C P H
 
AT1G23420.1     A H N K R A A S D Q C F C E E D N N A I L P C N V F E D - - - H E E S N N G F R E R K A Q R H S I W G K S P F E
gm000468_Glyma0    T Q C K E - D E E S C S S Q T D Q H V D L D S Q V D P N A V V N E E E G Q G L R G R K V P K N S I L E R T P F E
pt035033_POPTR_    V H Y K G - D G E S I G L E E E N - - - - - S T W S S D A A E V N I E S K G F H E R K V P R H Y M W A K T P F E
 
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