fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G23420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041095 not found in 213aa AT1G23420.1 not_1st 0.472406181 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G23420.1     MTKLPNMTTTLNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVN
pt041095_POPTR_ -------MSTLNHLFDLPDQICYVQCGFCTTILLVSVPCSSLSTVVTVICGHCTSLFSVN
                        :*********.***:*************** :*** **** *******:***

AT1G23420.1     LMKASFIPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDED
pt041095_POPTR_ MKKFSFLPFNRSTSLSYEDEL-RPEFNAQKGL---------EMQNS-FMAISSNNDEDDR
                : * **:*::  :***: **  : *. * .*:         * :**    :**.::**: 

AT1G23420.1     VSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH
pt041095_POPTR_ INQVNRVINKPPEKRQRGPSAYNRFIKEEIRRIKTENPRIAHKEAFSTAAKNWAHSPLVQ
                :.:* :*:*********.***** ********:*::** :******* ******* * .:

AT1G23420.1     NKRAASDQCFCEEDNNAILPCNVFEDHEESNNGFRERKAQRHSIWGKSPFE
pt041095_POPTR_ YCKDIDGESSGLEEENGSWSCDAADQVNVESKGLHERKVPRHSMWAKTPFE
                  :  ..:.   *::*.  .*:. :: : ..:*::***. ***:*.*:***
BoxShade v3.31 C (beta, 970507) Output
AT1G23420.1     M T K L P N M T T T L N H L F D L P G Q I C H V Q C G F C T T I L L V S V P F T S L S M V V T V R C G H C T S L L S V N
pt041095_POPTR_    - - - - - - - M S T L N H L F D L P D Q I C Y V Q C G F C T T I L L V S V P C S S L S T V V T V I C G H C T S L F S V N
 
AT1G23420.1     L M K A S F I P L H L L A S L S H L D E T G K E E V A A T D G V E E E A W K V N Q E K E N S P T T L V S S S D N E D E D
pt041095_POPTR_    M K K F S F L P F N R S T S L S Y E D E L - R P E F N A Q K G L - - - - - - - - - E M Q N S - F M A I S S N N D E D D R
 
AT1G23420.1     V S R V Y Q V V N K P P E K R Q R A P S A Y N C F I K E E I R R L K A Q N P S M A H K E A F S L A A K N W A H F P P A H
pt041095_POPTR_    I N Q V N R V I N K P P E K R Q R G P S A Y N R F I K E E I R R I K T E N P R I A H K E A F S T A A K N W A H S P L V Q
 
AT1G23420.1     N K R A A S D Q C F C E E D N N A I L P C N V F E D H E E S N N G F R E R K A Q R H S I W G K S P F E
pt041095_POPTR_    Y C K D I D G E S S G L E E E N G S W S C D A A D Q V N V E S K G L H E R K V P R H S M W A K T P F E
 
0