fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G23420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035033 not found in 216aa AT1G23420.1 1st_1st 0.498896247 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G23420.1     MTKLPNMTTTLNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVN
pt035033_POPTR_ -------MSTLNHLFDPPDQICYVQCGFCTTILLVSVPCSSSSTVVTVICGHCSSLLSVN
                        :******* *.***:*************** :* * **** ****:******

AT1G23420.1     LMKASFIPLHLLASLSHLDETGKE-----EVAATDGVEEEAWKVNQEKENSPTTLVSSSD
pt035033_POPTR_ LTKISFLPFNLLTSLSH-DQEQKELLSPDEVNAQKGLDTQS-----------SFIAISSD
                * * **:*::**:**** *:  **     ** * .*:: ::           : :. ***

AT1G23420.1     NEDEDVSR---VYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKN
pt035033_POPTR_ N-DEDIDKVNPVNRVINKPPEKRQRAPSAYNCFIKEEIRRLKTENPNMAHKEAFSTAAKN
                * ***:.:   * :*:**************************::**.******** ****

AT1G23420.1     WAHFPPAHNKRAASDQCFCEEDNNAILPCNVFEDHEESNNGFRERKAQRHSIWGKSPFE
pt035033_POPTR_ WAHCPHVHYK--GDGESIGLEEENSTWSSDAAEVNIES-KGFHERKVPRHYMWAKTPFE
                *** * .* *  ...:.:  *::*:  ..:. * : ** :**:***. ** :*.*:***
BoxShade v3.31 C (beta, 970507) Output
AT1G23420.1     M T K L P N M T T T L N H L F D L P G Q I C H V Q C G F C T T I L L V S V P F T S L S M V V T V R C G H C T S L L S V N
pt035033_POPTR_    - - - - - - - M S T L N H L F D P P D Q I C Y V Q C G F C T T I L L V S V P C S S S S T V V T V I C G H C S S L L S V N
 
AT1G23420.1     L M K A S F I P L H L L A S L S H L D E T G K E - - - - - E V A A T D G V E E E A W K V N Q E K E N S P T T L V S S S D
pt035033_POPTR_    L T K I S F L P F N L L T S L S H - D Q E Q K E L L S P D E V N A Q K G L D T Q S - - - - - - - - - - - S F I A I S S D
 
AT1G23420.1     N E D E D V S R - - - V Y Q V V N K P P E K R Q R A P S A Y N C F I K E E I R R L K A Q N P S M A H K E A F S L A A K N
pt035033_POPTR_    N - D E D I D K V N P V N R V I N K P P E K R Q R A P S A Y N C F I K E E I R R L K T E N P N M A H K E A F S T A A K N
 
AT1G23420.1     W A H F P P A H N K R A A S D Q C F C E E D N N A I L P C N V F E D H E E S N N G F R E R K A Q R H S I W G K S P F E
pt035033_POPTR_    W A H C P H V H Y K - - G D G E S I G L E E E N S T W S S D A A E V N I E S - K G F H E R K V P R H Y M W A K T P F E
 
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