fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G23420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035033 not found in 216aa AT1G23420.1 1st_1st 0.498896247 Ia
Pt041095 not found in 213aa AT1G23420.1 not_1st 0.472406181 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G23420.1     MTKLPNMTTTLNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVN
pt041095_POPTR_ -------MSTLNHLFDLPDQICYVQCGFCTTILLVSVPCSSLSTVVTVICGHCTSLFSVN
pt035033_POPTR_ -------MSTLNHLFDPPDQICYVQCGFCTTILLVSVPCSSSSTVVTVICGHCSSLLSVN
                        :******* *.***:*************** :* * **** ****:**:***

AT1G23420.1     LMKASFIPLHLLASLSHLDE----TGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDN
pt041095_POPTR_ MKKFSFLPFNRSTSLSYEDE----LRP-EFNAQKGLEMQ----------NSFMAISSNND
pt035033_POPTR_ LTKISFLPFNLLTSLSHDQEQKELLSPDEVNAQKGLDTQ----------SSFIAISSDND
                : * **:*::  :***: :*        *. * .*:: :          ..   :**.::

AT1G23420.1     ED-EDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAH
pt041095_POPTR_ ED-DRINQVNRVINKPPEKRQRGPSAYNRFIKEEIRRIKTENPRIAHKEAFSTAAKNWAH
pt035033_POPTR_ EDIDKVNPVNRVINKPPEKRQRAPSAYNCFIKEEIRRLKTENPNMAHKEAFSTAAKNWAH
                ** : :. * :*:*********.***** ********:*::** :******* *******

AT1G23420.1     FPPAHNKRAASDQCFCEEDNNAILPCNVFEDHEESNNGFRERKAQRHSIWGKSPFE
pt041095_POPTR_ SPLVQYCKDIDGESSGLEEENGSWSCDAADQVNVESKGLHERKVPRHSMWAKTPFE
pt035033_POPTR_ CPHVHY--KGDGESIGLEEENSTWSSDAA-EVNIESKGFHERKVPRHYMWAKTPFE
                 * .:     ..:.   *::*.  ..:.  : : ..:*::***. ** :*.*:***
BoxShade v3.31 C (beta, 970507) Output
AT1G23420.1     M T K L P N M T T T L N H L F D L P G Q I C H V Q C G F C T T I L L V S V P F T S L S M V V T V R C G H C T S L L S V N
pt041095_POPTR_    - - - - - - - M S T L N H L F D L P D Q I C Y V Q C G F C T T I L L V S V P C S S L S T V V T V I C G H C T S L F S V N
pt035033_POPTR_    - - - - - - - M S T L N H L F D P P D Q I C Y V Q C G F C T T I L L V S V P C S S S S T V V T V I C G H C S S L L S V N
 
AT1G23420.1     L M K A S F I P L H L L A S L S H L D E - - - - T G K E E V A A T D G V E E E A W K V N Q E K E N S P T T L V S S S D N
pt041095_POPTR_    M K K F S F L P F N R S T S L S Y E D E - - - - L R P - E F N A Q K G L E M Q - - - - - - - - - - N S F M A I S S N N D
pt035033_POPTR_    L T K I S F L P F N L L T S L S H D Q E Q K E L L S P D E V N A Q K G L D T Q - - - - - - - - - - S S F I A I S S D N D
 
AT1G23420.1     E D - E D V S R V Y Q V V N K P P E K R Q R A P S A Y N C F I K E E I R R L K A Q N P S M A H K E A F S L A A K N W A H
pt041095_POPTR_    E D - D R I N Q V N R V I N K P P E K R Q R G P S A Y N R F I K E E I R R I K T E N P R I A H K E A F S T A A K N W A H
pt035033_POPTR_    E D I D K V N P V N R V I N K P P E K R Q R A P S A Y N C F I K E E I R R L K T E N P N M A H K E A F S T A A K N W A H
 
AT1G23420.1     F P P A H N K R A A S D Q C F C E E D N N A I L P C N V F E D H E E S N N G F R E R K A Q R H S I W G K S P F E
pt041095_POPTR_    S P L V Q Y C K D I D G E S S G L E E E N G S W S C D A A D Q V N V E S K G L H E R K V P R H S M W A K T P F E
pt035033_POPTR_    C P H V H Y - - K G D G E S I G L E E E N S T W S S D A A - E V N I E S K G F H E R K V P R H Y M W A K T P F E
 
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