fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G23420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000468 not found in 216aa AT1G23420.1 1st_1st 0.507726269 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G23420.1     MTKLPNMTTTLNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVN
gm000468_Glyma0 -------MSTLNHLFDLPEQICYVECGFCATILMVSVPSSSLSMVVTVKCGHCTSVLSVN
                        :********* ***:*:****:***:**** :********:******:****

AT1G23420.1     LMKASFIPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDED
gm000468_Glyma0 MMKASFVPFHLLASLSHLEP--KESSSEQDA--------NKTLKRHNASMMTYSDCEEED
                :*****:*:*********:   **. :  *.        *:  :.  ::::: ** *:**

AT1G23420.1     VSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH
gm000468_Glyma0 AIPMSNVVNKPPEKRQRTPSAYNCFIKEEIKRLKAENPDMAHREAFSTAAKNWANFPPTQ
                .  : :***********:************:****:**.***:**** ******:***::

AT1G23420.1     NKRAASDQCFCEEDNNAILPCNVFED---HEESNNGFRERKAQRHSIWGKSPFE
gm000468_Glyma0 CKE-DEESCSSQTDQHVDLDSQVDPNAVVNEEEGQGLRGRKVPKNSILERTPFE
                 *.  .:.* .: *::. * .:*  :   :**..:*:* **. ::**  ::***
BoxShade v3.31 C (beta, 970507) Output
AT1G23420.1     M T K L P N M T T T L N H L F D L P G Q I C H V Q C G F C T T I L L V S V P F T S L S M V V T V R C G H C T S L L S V N
gm000468_Glyma0    - - - - - - - M S T L N H L F D L P E Q I C Y V E C G F C A T I L M V S V P S S S L S M V V T V K C G H C T S V L S V N
 
AT1G23420.1     L M K A S F I P L H L L A S L S H L D E T G K E E V A A T D G V E E E A W K V N Q E K E N S P T T L V S S S D N E D E D
gm000468_Glyma0    M M K A S F V P F H L L A S L S H L E P - - K E S S S E Q D A - - - - - - - - N K T L K R H N A S M M T Y S D C E E E D
 
AT1G23420.1     V S R V Y Q V V N K P P E K R Q R A P S A Y N C F I K E E I R R L K A Q N P S M A H K E A F S L A A K N W A H F P P A H
gm000468_Glyma0    A I P M S N V V N K P P E K R Q R T P S A Y N C F I K E E I K R L K A E N P D M A H R E A F S T A A K N W A N F P P T Q
 
AT1G23420.1     N K R A A S D Q C F C E E D N N A I L P C N V F E D - - - H E E S N N G F R E R K A Q R H S I W G K S P F E
gm000468_Glyma0    C K E - D E E S C S S Q T D Q H V D L D S Q V D P N A V V N E E E G Q G L R G R K V P K N S I L E R T P F E
 
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