fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032660 ACQGAALRLSLAFLDS in 197/692 AT1G25280.1 1st_1st 0.695201037 Ia
SPLIMGLSLMLAGQAE in 382/692
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G25280.1     ---MSFRGIVQDLRDGFGSLSRRSFDFRLSSL------HKGKAQGSSFREYSSSRDLLSP
Sb032660_Sorbi1 LAKMSFRSIVRDVRDSFGSLSRRSFEVTIAGLSGLTVHHRGKSQ-STVHEVCDT-DL---
                   ****.**:*:**.*********:. ::.*      *:**:* *:.:* ..: **   

AT1G25280.1     VIVQTSRWANLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEIC
Sb032660_Sorbi1 -IIQESRWANLPPELLRDVIRRLEASESTWPNRKHVVSCAAVCRAWREMCREIVLSPEFC
                 *:* *********** ***:*** ***.** *****:**:***:** **:****.**:*

AT1G25280.1     GKLTFPVSLKQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTT
Sb032660_Sorbi1 GKLTFPVSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLMENGKFLLSAKRNRKTT
                ****************.************ *:**:****.*:*:***********.*:**

AT1G25280.1     RTEYIISMDADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALI--TDRTSRSR
Sb032660_Sorbi1 CTEYVISMDAENISRSSSTYIGKLRSNFLGTKFMISDTQPPYN---GAVVPHAGRTSR-R
                 ***:*****:******.:*:************:: ***** *   .*::  :.**** *

AT1G25280.1     FHSRRVSPKVPSGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKL
Sb032660_Sorbi1 FNSKKVSPKVPTGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASAVEPGGIVPGQPEQI
                *:*::******:*******:*****************:*:*** *::**** **.***::

AT1G25280.1     VPAPYSLDDSFRSNISFSKSSFDHRSLDFSSSR-FSEMGIS--------CDDNEEEASFR
Sb032660_Sorbi1 LPR--ALEESFRSTTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGAAIAGDEEGQNKER
                :*   :*::****. ******: .**:****** **.  :*        ..*:* : . *

AT1G25280.1     PLILKNKQPRWHEQLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHP
Sb032660_Sorbi1 PLVLRNKAPRWHEQLQCWCLNFRGRVTIASVKNFQLIAAPSPAPAPAARAPTPSSQPVPQ
                **:*:** *******************:********:** .* *  :. *.:*:* *.  

AT1G25280.1     EQDKVILQFGKVGKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sb032660_Sorbi1 DQDKIILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
                :***:*******.********************************
BoxShade v3.31 C (beta, 970507) Output
AT1G25280.1     - - - M S F R G I V Q D L R D G F G S L S R R S F D F R L S S L - - - - - - H K G K A Q G S S F R E Y S S S R D L L S P
Sb032660_Sorbi1    L A K M S F R S I V R D V R D S F G S L S R R S F E V T I A G L S G L T V H H R G K S Q - S T V H E V C D T - D L - - -
 
AT1G25280.1     V I V Q T S R W A N L P P E L L F D V I K R L E E S E S N W P A R K H V V A C A S V C R S W R A M C Q E I V L G P E I C
Sb032660_Sorbi1    - I I Q E S R W A N L P P E L L R D V I R R L E A S E S T W P N R K H V V S C A A V C R A W R E M C R E I V L S P E F C
 
AT1G25280.1     G K L T F P V S L K Q P G P R D A M I Q C F I K R D K S K L T F H L F L C L S P A L L V E N G K F L L S A K R T R R T T
Sb032660_Sorbi1    G K L T F P V S L K Q P G P R D G M I Q C F I K R D K S K S T Y H L Y L C L S T A V L M E N G K F L L S A K R N R K T T
 
AT1G25280.1     R T E Y I I S M D A D N I S R S S N S Y L G K L R S N F L G T K F L V Y D T Q P P P N T S S S A L I - - T D R T S R S R
Sb032660_Sorbi1    C T E Y V I S M D A E N I S R S S S T Y I G K L R S N F L G T K F M I S D T Q P P Y N - - - G A V V P H A G R T S R - R
 
AT1G25280.1     F H S R R V S P K V P S G S Y N I A Q I T Y E L N V L G T R G P R R M H C I M N S I P I S S L E P G G S V P N Q P E K L
Sb032660_Sorbi1    F N S K K V S P K V P T G S Y N I A Q V T Y E L N V L G T R G P R R M H C V M H S I P A S A V E P G G I V P G Q P E Q I
 
AT1G25280.1     V P A P Y S L D D S F R S N I S F S K S S F D H R S L D F S S S R - F S E M G I S - - - - - - - - C D D N E E E A S F R
Sb032660_Sorbi1    L P R - - A L E E S F R S T T S F S K S S I M D R S M D F S S S R D F S S A R F S D I A G G A A I A G D E E G Q N K E R
 
AT1G25280.1     P L I L K N K Q P R W H E Q L Q C W C L N F R G R V T V A S V K N F Q L V A A R Q P Q P Q G T G A A A A P T S A P A H P
Sb032660_Sorbi1    P L V L R N K A P R W H E Q L Q C W C L N F R G R V T I A S V K N F Q L I A A P S P A P A P A A R A P T P S S Q P V P Q
 
AT1G25280.1     E Q D K V I L Q F G K V G K D M F T M D Y R Y P L S A F Q A F A I C L S S F D T K L A C E
Sb032660_Sorbi1    D Q D K I I L Q F G K V A K D M F T M D Y R Y P L S A F Q A F A I C L S S F D T K L A C E
 
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