fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041360 not found in 319aa AT1G68320.1 1st_not 0.464527027 II
Pt027357 not found in 332aa AT1G25340.1 not_1st 0.423986486 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G25340.1     ------MSNITKKKCNGNEEGAEQRKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKR
pt027357_POPTR_ MSEDIIMSSLKKSMTSSKEDGSELRRGPWTLEEDTLLVHYIGRHGEGRWNLLAKRAGLRR
pt041360_POPTR_ ------MLGVRKRICNPREEESELRRGPWTLEEDTLLTHYITRHGEGRWNMLARGAGLKR
                      * .: *   . .*: :* *:***********.:** ::******:**: :**:*

AT1G25340.1     AGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKISKYLPGRTDNDIKNYW
pt027357_POPTR_ TGKSCRLRWLNYLKPDVKRGNLTPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYW
pt041360_POPTR_ TGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYW
                :***************:**************:************:::*******:*****

AT1G25340.1     RTRVQKQARQLNIDSNSHKFIEVVRSFWFPRLINEIKDNSYTNNIKA-------------
pt027357_POPTR_ RTRVQKQARHLKIDANSTAFQNIIRWFWMPRLLQKIGGSSTSSSAMPSQRPA------VV
pt041360_POPTR_ RTKVQKEARQLNIEANSKRFLDAVRSYWMPRLIQKIEQASYSSSLTTLDSPADREVRSTS
                **:***:**:*:*::**  * : :* :*:***:::*   * :..  .             

AT1G25340.1     ------------NAPDLLGPI----------------------LRDSKDLGFNNMDCSTS
pt027357_POPTR_ SQPNLNYAPQFSTFPPALPPLVQQQEAPLDMSVTMHYLEPHEQTSDSE-LGTSS--CISS
pt041360_POPTR_ SNP-----PVHNSSPTLLCP------------------------PESR---FTH--CSNP
                            . *  * *                         :*.    .   * ..

AT1G25340.1     --------MSED-LKKTSQFMDFSDLETTMS------LEGSRG----GSSQC----VSEV
pt027357_POPTR_ AESMNVSQMSQLSEYPTSPFQAIGNNSSEYS-----------------------TLAKGC
pt041360_POPTR_ --------GSENSFSFTSPYL-LSTNSNTISQQPDEILENPSCSPLLGDTVCNNLILSDT
                         *:     ** :  :.  ..  *                          .  

AT1G25340.1     Y----SSFPCLEEEYMVAVM-GSSDISALHDCHVADSKYEDDVTQDLMWNMDDIWQFNEY
pt027357_POPTR_ YYVDSNCYDMEAINLATMPVPGELGISAG-DRHMEDGDWGAYDFGDTMWNMDELWQFRNL
pt041360_POPTR_ YNKEGSSYDMDVFNVASAGM-GTHDNSPL-ECQVAEGNWVFDSVEDTLWNMDDMWVFRDL
                *    ..:     :     : *  . *.  : :: :..:      * :****::* *.: 

AT1G25340.1     AHFN------
pt027357_POPTR_ QGKEN-----
pt041360_POPTR_ RETDRDKSIF
                   :
BoxShade v3.31 C (beta, 970507) Output
AT1G25340.1     - - - - - - M S N I T K K K C N G N E E G A E Q R K G P W T L E E D T L L T N Y I S H N G E G R W N L L A K S S G L K R
pt027357_POPTR_    M S E D I I M S S L K K S M T S S K E D G S E L R R G P W T L E E D T L L V H Y I G R H G E G R W N L L A K R A G L R R
pt041360_POPTR_    - - - - - - M L G V R K R I C N P R E E E S E L R R G P W T L E E D T L L T H Y I T R H G E G R W N M L A R G A G L K R
 
AT1G25340.1     A G K S C R L R W L N Y L K P D I K R G N L T P Q E Q L L I L E L H S K W G N R W S K I S K Y L P G R T D N D I K N Y W
pt027357_POPTR_    T G K S C R L R W L N Y L K P D V K R G N L T P Q E Q L L I L D L H S K W G N R W S K I A Q H L P G R T D N E I K N Y W
pt041360_POPTR_    T G K S C R L R W L N Y L K P D I K R G N L T P Q E Q L L I L E L H S K W G N R W S K I A Q H L P G R T D N E I K N Y W
 
AT1G25340.1     R T R V Q K Q A R Q L N I D S N S H K F I E V V R S F W F P R L I N E I K D N S Y T N N I K A - - - - - - - - - - - - -
pt027357_POPTR_    R T R V Q K Q A R H L K I D A N S T A F Q N I I R W F W M P R L L Q K I G G S S T S S S A M P S Q R P A - - - - - - V V
pt041360_POPTR_    R T K V Q K E A R Q L N I E A N S K R F L D A V R S Y W M P R L I Q K I E Q A S Y S S S L T T L D S P A D R E V R S T S
 
AT1G25340.1     - - - - - - - - - - - - N A P D L L G P I - - - - - - - - - - - - - - - - - - - - - - L R D S K D L G F N N M D C S T S
pt027357_POPTR_    S Q P N L N Y A P Q F S T F P P A L P P L V Q Q Q E A P L D M S V T M H Y L E P H E Q T S D S E - L G T S S - - C I S S
pt041360_POPTR_    S N P - - - - - P V H N S S P T L L C P - - - - - - - - - - - - - - - - - - - - - - - - P E S R - - - F T H - - C S N P
 
AT1G25340.1     - - - - - - - - M S E D - L K K T S Q F M D F S D L E T T M S - - - - - - L E G S R G - - - - G S S Q C - - - - V S E V
pt027357_POPTR_    A E S M N V S Q M S Q L S E Y P T S P F Q A I G N N S S E Y S - - - - - - - - - - - - - - - - - - - - - - - T L A K G C
pt041360_POPTR_    - - - - - - - - G S E N S F S F T S P Y L - L S T N S N T I S Q Q P D E I L E N P S C S P L L G D T V C N N L I L S D T
 
AT1G25340.1     Y - - - - S S F P C L E E E Y M V A V M - G S S D I S A L H D C H V A D S K Y E D D V T Q D L M W N M D D I W Q F N E Y
pt027357_POPTR_    Y Y V D S N C Y D M E A I N L A T M P V P G E L G I S A G - D R H M E D G D W G A Y D F G D T M W N M D E L W Q F R N L
pt041360_POPTR_    Y N K E G S S Y D M D V F N V A S A G M - G T H D N S P L - E C Q V A E G N W V F D S V E D T L W N M D D M W V F R D L
 
AT1G25340.1     A H F N - - - - - -
pt027357_POPTR_    Q G K E N - - - - -
pt041360_POPTR_    R E T D R D K S I F
 
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