fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035930 not found in 319aa AT1G68320.1 not_not 0.445945945 III
Pt023065 not found in 327aa AT1G68320.1 not_not 0.423986486 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G25340.1     ----MSNITKKKCNGNEEGAEQRKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAG
pt035930_POPTR_ MRASMLGVTRRICNSREEEGELRRGPWTLEEDTLLTRYIARNREGRWNMLAKCAGLKRTG
pt023065_POPTR_ MRVDIMSSSKKTTSSKEDDAELRRGPWTLEEDTLLVHYIARHGEGRWNLLAKRAGLRRTG
                    : . :::  ...*: .* *:***********..**::: *****:*** :**:*:*

AT1G25340.1     KSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRT
pt035930_POPTR_ KSCRLRWLNYLKPDVKRGNLTPQEQLLILELHSKLGNRWSKIAQHLPGRTDNEIKNYWRT
pt023065_POPTR_ KSCRLRWLNYLKPDVKRGNLTPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRT
                **************:**************:**** *******:::*******:*******

AT1G25340.1     RVQKQARQLNIDSNSHKFIEVVRSFWFPRLINEIKDNSYTNN-------------IKANA
pt035930_POPTR_ KVQKEARQLNIEASSTKFLDAVRSFWMPRLPQKMEQASYSSSSTTLDSQSQADHGVRSPS
pt023065_POPTR_ RVQKQARHLRIDANSTAFQDIIRRSWMPRLLQKIGGSSTSSSAMT----------CQSPA
                :***:**:*.*::.*  * : :*  *:*** :::   * :..              :: :

AT1G25340.1     PDLLGP------------------------------ILRDSKDLGFNNMDCSTS---MSE
pt035930_POPTR_ SNSTVP------SSLSTLLCPPESK------------LAHYSNLGSENSSPVTSPHVLSA
pt023065_POPTR_ VSQLIPNYAPQLSAFPTALPPPQQQEAPLDMSVMMHCMEHREQ--TSDSEHGTSSCISSA
                 .   *                               : . .:   .: .  **    * 

AT1G25340.1     DLKKTSQFMDFSDLETTMSLE--GSRGG--SSQCV-SEVY---SSFPCLE--EEYMVAVM
pt035930_POPTR_ NSDTISPQPEILENPTCSPL-----HGDTFYNNLILSDTCYEEGSCYDLDGFNQASAGM-
pt023065_POPTR_ ESMNVSQMSHLSEYPK-SPFQAMGNNGD--YSTLV-KDCYYVDSNFYDMEAINLATMSVP
                :  . *   .: :  .  .:     .*.   .  : .:     ..   ::  :    .: 

AT1G25340.1     GSSDISALHDCHVADSKYEDDVTQDLMWNMDDIWQFNEYAHFN-
pt035930_POPTR_ GTYDNSPL-ECQMAGGNWVFDSRVDTIWDMDDMWQFRDLRETGI
pt023065_POPTR_ GELGISAV-DRHMGDGDWAGYDFGDTVWNMDELWQFRNLQGKEI
                *  . *.: : ::....:      * :*:**::***.:
BoxShade v3.31 C (beta, 970507) Output
AT1G25340.1     - - - - M S N I T K K K C N G N E E G A E Q R K G P W T L E E D T L L T N Y I S H N G E G R W N L L A K S S G L K R A G
pt035930_POPTR_    M R A S M L G V T R R I C N S R E E E G E L R R G P W T L E E D T L L T R Y I A R N R E G R W N M L A K C A G L K R T G
pt023065_POPTR_    M R V D I M S S S K K T T S S K E D D A E L R R G P W T L E E D T L L V H Y I A R H G E G R W N L L A K R A G L R R T G
 
AT1G25340.1     K S C R L R W L N Y L K P D I K R G N L T P Q E Q L L I L E L H S K W G N R W S K I S K Y L P G R T D N D I K N Y W R T
pt035930_POPTR_    K S C R L R W L N Y L K P D V K R G N L T P Q E Q L L I L E L H S K L G N R W S K I A Q H L P G R T D N E I K N Y W R T
pt023065_POPTR_    K S C R L R W L N Y L K P D V K R G N L T P Q E Q L L I L D L H S K W G N R W S K I A Q H L P G R T D N E I K N Y W R T
 
AT1G25340.1     R V Q K Q A R Q L N I D S N S H K F I E V V R S F W F P R L I N E I K D N S Y T N N - - - - - - - - - - - - - I K A N A
pt035930_POPTR_    K V Q K E A R Q L N I E A S S T K F L D A V R S F W M P R L P Q K M E Q A S Y S S S S T T L D S Q S Q A D H G V R S P S
pt023065_POPTR_    R V Q K Q A R H L R I D A N S T A F Q D I I R R S W M P R L L Q K I G G S S T S S S A M T - - - - - - - - - - C Q S P A
 
AT1G25340.1     P D L L G P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I L R D S K D L G F N N M D C S T S - - - M S E
pt035930_POPTR_    S N S T V P - - - - - - S S L S T L L C P P E S K - - - - - - - - - - - - L A H Y S N L G S E N S S P V T S P H V L S A
pt023065_POPTR_    V S Q L I P N Y A P Q L S A F P T A L P P P Q Q Q E A P L D M S V M M H C M E H R E Q - - T S D S E H G T S S C I S S A
 
AT1G25340.1     D L K K T S Q F M D F S D L E T T M S L E - - G S R G G - - S S Q C V - S E V Y - - - S S F P C L E - - E E Y M V A V M
pt035930_POPTR_    N S D T I S P Q P E I L E N P T C S P L - - - - - H G D T F Y N N L I L S D T C Y E E G S C Y D L D G F N Q A S A G M -
pt023065_POPTR_    E S M N V S Q M S H L S E Y P K - S P F Q A M G N N G D - - Y S T L V - K D C Y Y V D S N F Y D M E A I N L A T M S V P
 
AT1G25340.1     G S S D I S A L H D C H V A D S K Y E D D V T Q D L M W N M D D I W Q F N E Y A H F N -
pt035930_POPTR_    G T Y D N S P L - E C Q M A G G N W V F D S R V D T I W D M D D M W Q F R D L R E T G I
pt023065_POPTR_    G E L G I S A V - D R H M G D G D W A G Y D F G D T V W N M D E L W Q F R N L Q G K E I
 
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