fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm013215 not found in 317aa AT1G68320.1 not_not 0.407094594 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G25340.1     MSNITKKKCNGNEEGAEQRKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAGKSCR
gm013215_Glyma0 MST-SKSVSSSSEDDNELRRGPWTLEEDNLLSQYISSHGEGRWNLLAKRSGLKRTGKSCR
                **. :*. ....*:. * *:********.**::*** :********** *****:*****

AT1G25340.1     LRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQK
gm013215_Glyma0 LRWLNYLKPDVKRGNLTPQEQLIILELHSKWGNRWSKIAQNLPGRTDNEIKNYWRTRIQK
                **********:***********:***************:: *******:********:**

AT1G25340.1     QARQLNIDSNSHKFIEVVRSFWFPRLINEIKDNSYTN-NIKANAPDL-------------
gm013215_Glyma0 QARHLKIDTDSREFQELVRRFWMPRLLQKAKESSSSAMSIQNQATPMPFDGVSQHSTVGT
                ***:*:**::*::* *:** **:***::: *:.* :  .*: :*. :             

AT1G25340.1     ----------------LGPILRD----SKDLGFNNMDC-STSMSEDLKKTSQFMDFSDLE
gm013215_Glyma0 IPSHSHTPWQGPCMNEAGPTYMDQHEQNSDSEHNNGSCISLSESANFPKVPQHFGRTTIT
                                 **   *    ..*  .** .* * * * :: *..*.:. : : 

AT1G25340.1     TTMSLEGSRGGSSQCVSEVYSSFPCLEEEYMVAVMGSSDISALH-------DCHVADSKY
gm013215_Glyma0 QYHALNNNDFGTF-----TYDGYNVSNNVYEMDNFKTPTTRVAEDAQYPTGDCQMVGSNW
                   :*:..  *:      .*..:   :: * :  : :.   . .       **::..*::

AT1G25340.1     EDDVTQDL---MWNMDDIWQFNEYAHFN
gm013215_Glyma0 ---VNSDFACNMWNMDELWQFSKLQK--
                   *..*:   *****::***.:  :
BoxShade v3.31 C (beta, 970507) Output
AT1G25340.1     M S N I T K K K C N G N E E G A E Q R K G P W T L E E D T L L T N Y I S H N G E G R W N L L A K S S G L K R A G K S C R
gm013215_Glyma0    M S T - S K S V S S S S E D D N E L R R G P W T L E E D N L L S Q Y I S S H G E G R W N L L A K R S G L K R T G K S C R
 
AT1G25340.1     L R W L N Y L K P D I K R G N L T P Q E Q L L I L E L H S K W G N R W S K I S K Y L P G R T D N D I K N Y W R T R V Q K
gm013215_Glyma0    L R W L N Y L K P D V K R G N L T P Q E Q L I I L E L H S K W G N R W S K I A Q N L P G R T D N E I K N Y W R T R I Q K
 
AT1G25340.1     Q A R Q L N I D S N S H K F I E V V R S F W F P R L I N E I K D N S Y T N - N I K A N A P D L - - - - - - - - - - - - -
gm013215_Glyma0    Q A R H L K I D T D S R E F Q E L V R R F W M P R L L Q K A K E S S S S A M S I Q N Q A T P M P F D G V S Q H S T V G T
 
AT1G25340.1     - - - - - - - - - - - - - - - - L G P I L R D - - - - S K D L G F N N M D C - S T S M S E D L K K T S Q F M D F S D L E
gm013215_Glyma0    I P S H S H T P W Q G P C M N E A G P T Y M D Q H E Q N S D S E H N N G S C I S L S E S A N F P K V P Q H F G R T T I T
 
AT1G25340.1     T T M S L E G S R G G S S Q C V S E V Y S S F P C L E E E Y M V A V M G S S D I S A L H - - - - - - - D C H V A D S K Y
gm013215_Glyma0    Q Y H A L N N N D F G T F - - - - - T Y D G Y N V S N N V Y E M D N F K T P T T R V A E D A Q Y P T G D C Q M V G S N W
 
AT1G25340.1     E D D V T Q D L - - - M W N M D D I W Q F N E Y A H F N
gm013215_Glyma0    - - - V N S D F A C N M W N M D E L W Q F S K L Q K - -
 
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