fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm020185 not found in 312aa AT1G25340.1 1st_1st 0.415540540 Ia
Gm013215 not found in 317aa AT1G68320.1 not_not 0.407094594 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G25340.1     MSNITKKKCNGNEEGAEQRKGPWTLEEDTLLTNYISHNGEGRWNLLAKSSGLKRAGKSCR
gm013215_Glyma0 MST-SKSVSSSSEDDNELRRGPWTLEEDNLLSQYISSHGEGRWNLLAKRSGLKRTGKSCR
gm020185_Glyma0 MST-SKSVSSSSEDDNELRRGPWTLEEDNLLSQYIFNHGEGRWNLLAKRSGLKRTGKSCR
                **. :*. ....*:. * *:********.**::**  :********** *****:*****

AT1G25340.1     LRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQK
gm013215_Glyma0 LRWLNYLKPDVKRGNLTPQEQLIILELHSKWGNRWSKIAQNLPGRTDNEIKNYWRTRIQK
gm020185_Glyma0 LRWLNYLKPDVKRGNLTPQEQLIILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRIQK
                **********:***********:***************:: *******:********:**

AT1G25340.1     QARQLNIDSNSHKFIEVVRSFWFPRLINEIKDNSYTN-NIKANA----------------
gm013215_Glyma0 QARHLKIDTDSREFQELVRRFWMPRLLQKAKESSSSAMSIQNQATPMPFDGVSQHSTVGT
gm020185_Glyma0 QARHLKIYTDSREFQELVRRFWMPRLLQKAKESSSSNMSIQNQAIPMPFDYVSQHLTVGT
                ***:*:* ::*::* *:** **:***::: *:.* :  .*: :*                

AT1G25340.1     -P-----DLLGPILRDS-----------KDLGFNNMDC-STSMSEDLKKTSQFMDFSDLE
gm013215_Glyma0 IPSHSHTPWQGPCMNEAGPTYMDQHEQNSDSEHNNGSCISLSESANFPKVPQHFGRTTIT
gm020185_Glyma0 IP-----PWQGPCMNEAGPTYMDQHEQNSDSEHNNGSCISLSESANIPKVPQHFGHTTIT
                 *        ** :.::           .*  .** .* * * * :: *..*.:. : : 

AT1G25340.1     TTMSLEGSRGGS-----SQCVSEVY--------SSFPCLEEEYMVAVMGSSDISALHDCH
gm013215_Glyma0 QYHALNNNDFGTFTYDGYNVSNNVYEMDNFKTPTTRVAEDAQYPTG-----------DCQ
gm020185_Glyma0 QFHALNTNDFGTFTYEGYNVNNNVYEMDNFKTTTTWVAEDAQYPIG-----------DCQ
                   :*: .  *:      :  .:**        ::  . : :*  .           **:

AT1G25340.1     VADSKYEDDVTQDL---MWNMDDIWQFNEYAHFN
gm013215_Glyma0 MVGSNW---VNSDFACNMWNMDELWQFSKLQK--
gm020185_Glyma0 MVGSNW---VNNDFACNMWNMDELWQFSKLQK--
                :..*::   *..*:   *****::***.:  :
BoxShade v3.31 C (beta, 970507) Output
AT1G25340.1     M S N I T K K K C N G N E E G A E Q R K G P W T L E E D T L L T N Y I S H N G E G R W N L L A K S S G L K R A G K S C R
gm013215_Glyma0    M S T - S K S V S S S S E D D N E L R R G P W T L E E D N L L S Q Y I S S H G E G R W N L L A K R S G L K R T G K S C R
gm020185_Glyma0    M S T - S K S V S S S S E D D N E L R R G P W T L E E D N L L S Q Y I F N H G E G R W N L L A K R S G L K R T G K S C R
 
AT1G25340.1     L R W L N Y L K P D I K R G N L T P Q E Q L L I L E L H S K W G N R W S K I S K Y L P G R T D N D I K N Y W R T R V Q K
gm013215_Glyma0    L R W L N Y L K P D V K R G N L T P Q E Q L I I L E L H S K W G N R W S K I A Q N L P G R T D N E I K N Y W R T R I Q K
gm020185_Glyma0    L R W L N Y L K P D V K R G N L T P Q E Q L I I L E L H S K W G N R W S K I A Q H L P G R T D N E I K N Y W R T R I Q K
 
AT1G25340.1     Q A R Q L N I D S N S H K F I E V V R S F W F P R L I N E I K D N S Y T N - N I K A N A - - - - - - - - - - - - - - - -
gm013215_Glyma0    Q A R H L K I D T D S R E F Q E L V R R F W M P R L L Q K A K E S S S S A M S I Q N Q A T P M P F D G V S Q H S T V G T
gm020185_Glyma0    Q A R H L K I Y T D S R E F Q E L V R R F W M P R L L Q K A K E S S S S N M S I Q N Q A I P M P F D Y V S Q H L T V G T
 
AT1G25340.1     - P - - - - - D L L G P I L R D S - - - - - - - - - - - K D L G F N N M D C - S T S M S E D L K K T S Q F M D F S D L E
gm013215_Glyma0    I P S H S H T P W Q G P C M N E A G P T Y M D Q H E Q N S D S E H N N G S C I S L S E S A N F P K V P Q H F G R T T I T
gm020185_Glyma0    I P - - - - - P W Q G P C M N E A G P T Y M D Q H E Q N S D S E H N N G S C I S L S E S A N I P K V P Q H F G H T T I T
 
AT1G25340.1     T T M S L E G S R G G S - - - - - S Q C V S E V Y - - - - - - - - S S F P C L E E E Y M V A V M G S S D I S A L H D C H
gm013215_Glyma0    Q Y H A L N N N D F G T F T Y D G Y N V S N N V Y E M D N F K T P T T R V A E D A Q Y P T G - - - - - - - - - - - D C Q
gm020185_Glyma0    Q F H A L N T N D F G T F T Y E G Y N V N N N V Y E M D N F K T T T T W V A E D A Q Y P I G - - - - - - - - - - - D C Q
 
AT1G25340.1     V A D S K Y E D D V T Q D L - - - M W N M D D I W Q F N E Y A H F N
gm013215_Glyma0    M V G S N W - - - V N S D F A C N M W N M D E L W Q F S K L Q K - -
gm020185_Glyma0    M V G S N W - - - V N N D F A C N M W N M D E L W Q F S K L Q K - -
 
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