fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp011966 not found in 413aa AT1G25440.1 1st_1st 0.184895833 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G25440.1     MMKSLAN-------AVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARR
pp011966_Pp1s12 MATKVANSSVAIAMAFAGRAVRACDVCAKKNAHWFCSADDAYLCTACDTQVHSANALSLR
                * ..:**       *...::.**** *.*:.*:*:*:****:** :**: *****.*: *

AT1G25440.1     HERVRLKTASPAVVKHSNHSSASPPHEVATWHHGFTRKARTP--------RGSGKKNNSS
pp011966_Pp1s12 HERVRLSPNGTPMLSLAKESKV--PDEAGCGIHRMKKLHPAPKQVQPARKRSKVTKPYSH
                ******.. ...::. ::.*..  *.*..   * :.:   :*        *.. .*  * 

AT1G25440.1     IFHDLVPDISIEDQTDNYELEEQLI--CQVPVLDPLVSEQFLNDVVEPKIEFPMIRSGLM
pp011966_Pp1s12 HLRKLTRMVS----KDMMKSEDSVAVKAELELFDFLDTDEFLN--TETR------RSHLC
                 ::.*.  :*    .*  : *:.:   .:: ::* * :::***  .*.:      ** * 

AT1G25440.1     IEEE---EDNAESCLNGFFPT----------DMELEEF--AADVETLLGRGLDTESYAME
pp011966_Pp1s12 LLDQFLVPDAFDFCLNVDMPVATTTPADANIDLSGEAFFLPGDIP-----GLDGFESFVP
                : ::    *  : ***  :*.          *:. * *  ..*:      ***  .  : 

AT1G25440.1     ELGLSN--SEMFKIE-KDEIEEEVEEIKAMSMDIFDDDRKDVDGTV--PFELSF----DY
pp011966_Pp1s12 EMGLTDDFSLTFDLALQNGLEAPIEATEPAKFE-YKPNPAEPDHITAGPFAKFFAQKPKA
                *:**::  *  *.:  :: :*  :*  :. .:: :. :  : *  .  **   *    . 

AT1G25440.1     ESSHKTSEEEVMKNVESSGECVVKVKEEEHKNVLM--LRLNYDSVISTWGGQGPPWSSGE
pp011966_Pp1s12 ESQELISPEQVKREAMEMLKC---CREGDHEGLNMPSLKLNMKDILAEWSNRGEPWISS-
                **..  * *:* ::. .  :*    :* :*:.: *  *:** ..::: *..:* ** *. 

AT1G25440.1     PPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSGFGDGGREARVSRYREKRRTRLF
pp011966_Pp1s12 ----DDSISSGSDVGLVPDMDAVTADESQSG----------GDRDARVLRYKEKRATRLF
                    * .**. . ..:* : .  * ::.  *          *.*:*** **:*** ****

AT1G25440.1     SKKIRYEVRKLNAEKRPRMKGRFVKRASLAAAASPLGVNY
pp011966_Pp1s12 SKKIRYEVRKVNAERRPRMKGRFVKRTSSSS---------
                **********:***:***********:* ::
BoxShade v3.31 C (beta, 970507) Output
AT1G25440.1     M M K S L A N - - - - - - - A V G A K T A R A C D S C V K R R A R W Y C A A D D A F L C Q S C D S L V H S A N P L A R R
pp011966_Pp1s12    M A T K V A N S S V A I A M A F A G R A V R A C D V C A K K N A H W F C S A D D A Y L C T A C D T Q V H S A N A L S L R
 
AT1G25440.1     H E R V R L K T A S P A V V K H S N H S S A S P P H E V A T W H H G F T R K A R T P - - - - - - - - R G S G K K N N S S
pp011966_Pp1s12    H E R V R L S P N G T P M L S L A K E S K V - - P D E A G C G I H R M K K L H P A P K Q V Q P A R K R S K V T K P Y S H
 
AT1G25440.1     I F H D L V P D I S I E D Q T D N Y E L E E Q L I - - C Q V P V L D P L V S E Q F L N D V V E P K I E F P M I R S G L M
pp011966_Pp1s12    H L R K L T R M V S - - - - K D M M K S E D S V A V K A E L E L F D F L D T D E F L N - - T E T R - - - - - - R S H L C
 
AT1G25440.1     I E E E - - - E D N A E S C L N G F F P T - - - - - - - - - - D M E L E E F - - A A D V E T L L G R G L D T E S Y A M E
pp011966_Pp1s12    L L D Q F L V P D A F D F C L N V D M P V A T T T P A D A N I D L S G E A F F L P G D I P - - - - - G L D G F E S F V P
 
AT1G25440.1     E L G L S N - - S E M F K I E - K D E I E E E V E E I K A M S M D I F D D D R K D V D G T V - - P F E L S F - - - - D Y
pp011966_Pp1s12    E M G L T D D F S L T F D L A L Q N G L E A P I E A T E P A K F E - Y K P N P A E P D H I T A G P F A K F F A Q K P K A
 
AT1G25440.1     E S S H K T S E E E V M K N V E S S G E C V V K V K E E E H K N V L M - - L R L N Y D S V I S T W G G Q G P P W S S G E
pp011966_Pp1s12    E S Q E L I S P E Q V K R E A M E M L K C - - - C R E G D H E G L N M P S L K L N M K D I L A E W S N R G E P W I S S -
 
AT1G25440.1     P P E R D M D I S G W P A F S M V E N G G E S T H Q K Q Y V G G C L P S S G F G D G G R E A R V S R Y R E K R R T R L F
pp011966_Pp1s12    - - - - D D S I S S G S D V G L V P D M D A V T A D E S Q S G - - - - - - - - - - G D R D A R V L R Y K E K R A T R L F
 
AT1G25440.1     S K K I R Y E V R K L N A E K R P R M K G R F V K R A S L A A A A S P L G V N Y
pp011966_Pp1s12    S K K I R Y E V R K V N A E R R P R M K G R F V K R T S S S S - - - - - - - - -
 
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