fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028285 not found in 383aa AT1G25550.1 1st_1st 0.421138211 Ia
Pt034451 not found in 390aa AT1G25550.1 1st_1st 0.508943089 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G25550.1     MMMFKSGDMDYTQKMKRCH----EYVEALEEEQKKIQVFQRELPLCLELVTQAIESCRKE
pt034451_POPTR_ --------MDFAEKMQRCH----EYVEALEEERRKIQVFERELPLCLELVTQAIEACKRE
gm028285_Glyma1 -MYF------FTEKMHSLKMGFPDYIQTLEEERRKIQVFSKELPLSLELVTQAIEACKQQ
                          :::**:  :    :*:::****::*****.:****.*********:*:::

AT1G25550.1     LSESSE--HVGGQSECSERTTSECGGAVFEEFMPIKWSSASS---DE---TDKDEEAE-K
pt034451_POPTR_ LSGTTEDHNMHGQSECSEQTSSE--GPVLEEFIPIKRTHSSD---DEENDNNHDDDDH-Q
gm028285_Glyma1 LSGTASEYNLNGHSECSEQTTST-EGPVLEEFIPIKKMASSSPFCDE---EDEDDEQHSH
                ** ::.  :: *:*****:*:*   *.*:***:***   :*.   **    :.*:: . :

AT1G25550.1     TEMMTNEN----------NDGDKKKSDWLRSVQLWNQSPDP---QPNNKKPMVIEVKR--
pt034451_POPTR_ EQQSQNDNKRNKSNSSISNNDHKKKSDWLRSVQLWNQSPDPPQKQDLPRKAAVTEVKRNG
gm028285_Glyma1 KQRVSKEN----------NNSDKRKSDWLRSVQLWN--PDPPAEEDVNKKVPGLELKRSG
                 :   ::*          *:..*:************  ***   :   :*    *:**  

AT1G25550.1     -SAGAFQPFQKEKPKAADS-QPLIKAITPTSTTTTSSTAETV----GGGKEFEEQKQSHS
pt034451_POPTR_ -AGGAFQPFHREKSVGKSSNQAISKAPPSVPASATSSIAGAVTGGTGGGGNKKEDKEKGN
gm028285_Glyma1 NGGGAFQPFHKEERGAKTS-ESLSKAPSSTSVAAASSSAAEPAA---------EKSLNEG
                 ..******::*:  .  * :.: ** .....:::** *              *.. . .

AT1G25550.1     NRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRLHTR
pt034451_POPTR_ QRKQRRCWSPELHRRFLHSLQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTR
gm028285_Glyma1 HRKQRRCWSQDLHKRFLHALQQLGGADTATPKQIREIMNVDGLTNDEVKSHLQKYRLHTR
                :******** :**:****:******:..*******::*:*********************

AT1G25550.1     RPATPVVRTGGENPQQRQFMVMEGIWVP----------------SHDTTNNRVYAPVATQ
pt034451_POPTR_ RP-SPTIHTNSSQ-QAPQFVVVGGIWVPPTEYAAVAATTTAGETSTISAANGIYAPIAAP
gm028285_Glyma1 RP-SPMVH-NSSNPQAAPFVLVGNIFVQSPEYAAVATSTASREVATVAAPAGIYAPVATH
                ** :* :: ...: *   *::: .*:*                 :  ::   :***:*: 

AT1G25550.1     PP------------------------QSSTSGERSNRGC----KSPATSSTTTHTPHLLP
pt034451_POPTR_ PPAV----------PQNRQHKQSEHSQSEGRGSHGERGGAHSNNSPATSS-STHTTTTSP
gm028285_Glyma1 PIPVSHPPADSIKNPQFKKVQLFEHSISDERANHSE-GAVHS-NSPTSSS-STHTSTSLG
                *                          *.  ..:.: *     :**::** :***.    

AT1G25550.1     LS
pt034451_POPTR_ VF
gm028285_Glyma1 Y-
BoxShade v3.31 C (beta, 970507) Output
AT1G25550.1     M M M F K S G D M D Y T Q K M K R C H - - - - E Y V E A L E E E Q K K I Q V F Q R E L P L C L E L V T Q A I E S C R K E
pt034451_POPTR_    - - - - - - - - M D F A E K M Q R C H - - - - E Y V E A L E E E R R K I Q V F E R E L P L C L E L V T Q A I E A C K R E
gm028285_Glyma1    - M Y F - - - - - - F T E K M H S L K M G F P D Y I Q T L E E E R R K I Q V F S K E L P L S L E L V T Q A I E A C K Q Q
 
AT1G25550.1     L S E S S E - - H V G G Q S E C S E R T T S E C G G A V F E E F M P I K W S S A S S - - - D E - - - T D K D E E A E - K
pt034451_POPTR_    L S G T T E D H N M H G Q S E C S E Q T S S E - - G P V L E E F I P I K R T H S S D - - - D E E N D N N H D D D D H - Q
gm028285_Glyma1    L S G T A S E Y N L N G H S E C S E Q T T S T - E G P V L E E F I P I K K M A S S S P F C D E - - - E D E D D E Q H S H
 
AT1G25550.1     T E M M T N E N - - - - - - - - - - N D G D K K K S D W L R S V Q L W N Q S P D P - - - Q P N N K K P M V I E V K R - -
pt034451_POPTR_    E Q Q S Q N D N K R N K S N S S I S N N D H K K K S D W L R S V Q L W N Q S P D P P Q K Q D L P R K A A V T E V K R N G
gm028285_Glyma1    K Q R V S K E N - - - - - - - - - - N N S D K R K S D W L R S V Q L W N - - P D P P A E E D V N K K V P G L E L K R S G
 
AT1G25550.1     - S A G A F Q P F Q K E K P K A A D S - Q P L I K A I T P T S T T T T S S T A E T V - - - - G G G K E F E E Q K Q S H S
pt034451_POPTR_    - A G G A F Q P F H R E K S V G K S S N Q A I S K A P P S V P A S A T S S I A G A V T G G T G G G G N K K E D K E K G N
gm028285_Glyma1    N G G G A F Q P F H K E E R G A K T S - E S L S K A P S S T S V A A A S S S A A E P A A - - - - - - - - - E K S L N E G
 
AT1G25550.1     N R K Q R R C W S P E L H R R F L H A L Q Q L G G S H V A T P K Q I R D L M K V D G L T N D E V K S H L Q K Y R L H T R
pt034451_POPTR_    Q R K Q R R C W S P E L H R R F L H S L Q Q L G G S H A A T P K Q I R E L M K V D G L T N D E V K S H L Q K Y R L H T R
gm028285_Glyma1    H R K Q R R C W S Q D L H K R F L H A L Q Q L G G A D T A T P K Q I R E I M N V D G L T N D E V K S H L Q K Y R L H T R
 
AT1G25550.1     R P A T P V V R T G G E N P Q Q R Q F M V M E G I W V P - - - - - - - - - - - - - - - - S H D T T N N R V Y A P V A T Q
pt034451_POPTR_    R P - S P T I H T N S S Q - Q A P Q F V V V G G I W V P P T E Y A A V A A T T T A G E T S T I S A A N G I Y A P I A A P
gm028285_Glyma1    R P - S P M V H - N S S N P Q A A P F V L V G N I F V Q S P E Y A A V A T S T A S R E V A T V A A P A G I Y A P V A T H
 
AT1G25550.1     P P - - - - - - - - - - - - - - - - - - - - - - - - Q S S T S G E R S N R G C - - - - K S P A T S S T T T H T P H L L P
pt034451_POPTR_    P P A V - - - - - - - - - - P Q N R Q H K Q S E H S Q S E G R G S H G E R G G A H S N N S P A T S S - S T H T T T T S P
gm028285_Glyma1    P I P V S H P P A D S I K N P Q F K K V Q L F E H S I S D E R A N H S E - G A V H S - N S P T S S S - S T H T S T S L G
 
AT1G25550.1     L S
pt034451_POPTR_    V F
gm028285_Glyma1    Y -
 
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