fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028285 not found in 383aa AT1G25550.1 1st_1st 0.421138211 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G25550.1     MMMFKSGDMDYTQKMKRCH----EYVEALEEEQKKIQVFQRELPLCLELVTQAIESCRKE
gm028285_Glyma1 -MYF------FTEKMHSLKMGFPDYIQTLEEERRKIQVFSKELPLSLELVTQAIEACKQQ
                 * *      :*:**:  :    :*:::****::*****.:****.*********:*:::

AT1G25550.1     LS--ESSEHVGGQSECSERTTSECGGAVFEEFMPIKWSSASS---DETDKDEEAEK-TEM
gm028285_Glyma1 LSGTASEYNLNGHSECSEQTTST-EGPVLEEFIPIKKMASSSPFCDEEDEDDEQHSHKQR
                **   *. ::.*:*****:***   *.*:***:***  ::**   ** *:*:* .. .: 

AT1G25550.1     MTNENNDGDKKKSDWLRSVQLWNQSPDPQPN---NKKPMVIEVKRS---AGAFQPFQKEK
gm028285_Glyma1 VSKENNNSDKRKSDWLRSVQLWN--PDPPAEEDVNKKVPGLELKRSGNGGGAFQPFHKEE
                :::***:.**:************  *** .:   ***   :*:***   .******:**:

AT1G25550.1     PKAADSQPLIKAITPTSTTTTSSTAETVGGGKEFEEQKQSHSNRKQRRCWSPELHRRFLH
gm028285_Glyma1 RGAKTSESLSKAPSSTSVAAASSSAAEPAAEKSLNE-----GHRKQRRCWSQDLHKRFLH
                  *  *:.* ** :.**.:::**:*   .. *.::*     .:******** :**:****

AT1G25550.1     ALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRLHTRRPATPVVRTGGENPQQRQ
gm028285_Glyma1 ALQQLGGADTATPKQIREIMNVDGLTNDEVKSHLQKYRLHTRRP-SPMVHN-SSNPQAAP
                *******:..*******::*:*********************** :*:*:. ..***   

AT1G25550.1     FMVMEGIWVPSHD------TTNNR----------VYAPVATQP-------------PQ--
gm028285_Glyma1 FVLVGNIFVQSPEYAAVATSTASREVATVAAPAGIYAPVATHPIPVSHPPADSIKNPQFK
                *::: .*:* * :      :* .*          :******:*             **  

AT1G25550.1     ------SSTSGERSNRG-----CKSPATSSTTTHTPHLLPLS
gm028285_Glyma1 KVQLFEHSISDERANHSEGAVHSNSP-TSSSSTHTSTSLGY-
                       * *.**:*:.     .:** ***::***.  *
BoxShade v3.31 C (beta, 970507) Output
AT1G25550.1     M M M F K S G D M D Y T Q K M K R C H - - - - E Y V E A L E E E Q K K I Q V F Q R E L P L C L E L V T Q A I E S C R K E
gm028285_Glyma1    - M Y F - - - - - - F T E K M H S L K M G F P D Y I Q T L E E E R R K I Q V F S K E L P L S L E L V T Q A I E A C K Q Q
 
AT1G25550.1     L S - - E S S E H V G G Q S E C S E R T T S E C G G A V F E E F M P I K W S S A S S - - - D E T D K D E E A E K - T E M
gm028285_Glyma1    L S G T A S E Y N L N G H S E C S E Q T T S T - E G P V L E E F I P I K K M A S S S P F C D E E D E D D E Q H S H K Q R
 
AT1G25550.1     M T N E N N D G D K K K S D W L R S V Q L W N Q S P D P Q P N - - - N K K P M V I E V K R S - - - A G A F Q P F Q K E K
gm028285_Glyma1    V S K E N N N S D K R K S D W L R S V Q L W N - - P D P P A E E D V N K K V P G L E L K R S G N G G G A F Q P F H K E E
 
AT1G25550.1     P K A A D S Q P L I K A I T P T S T T T T S S T A E T V G G G K E F E E Q K Q S H S N R K Q R R C W S P E L H R R F L H
gm028285_Glyma1    R G A K T S E S L S K A P S S T S V A A A S S S A A E P A A E K S L N E - - - - - G H R K Q R R C W S Q D L H K R F L H
 
AT1G25550.1     A L Q Q L G G S H V A T P K Q I R D L M K V D G L T N D E V K S H L Q K Y R L H T R R P A T P V V R T G G E N P Q Q R Q
gm028285_Glyma1    A L Q Q L G G A D T A T P K Q I R E I M N V D G L T N D E V K S H L Q K Y R L H T R R P - S P M V H N - S S N P Q A A P
 
AT1G25550.1     F M V M E G I W V P S H D - - - - - - T T N N R - - - - - - - - - - V Y A P V A T Q P - - - - - - - - - - - - - P Q - -
gm028285_Glyma1    F V L V G N I F V Q S P E Y A A V A T S T A S R E V A T V A A P A G I Y A P V A T H P I P V S H P P A D S I K N P Q F K
 
AT1G25550.1     - - - - - - S S T S G E R S N R G - - - - - C K S P A T S S T T T H T P H L L P L S
gm028285_Glyma1    K V Q L F E H S I S D E R A N H S E G A V H S N S P - T S S S S T H T S T S L G Y -
 
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