fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028285 not found in 383aa AT1G25550.1 1st_1st 0.421138211 Ia
Gm055127 not found in 381aa AT1G25550.1 not_1st 0.404878048 II
Gm000999 not found in 379aa AT1G25550.1 not_1st 0.404878048 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G25550.1     MMMFKSGDMDYTQKMKRCH----EYVEALEEEQKKIQVFQRELPLCLELVTQAIESCRKE
gm028285_Glyma1 MYFF-------TEKMHSLKMGFPDYIQTLEEERRKIQVFSKELPLSLELVTQAIEACKQQ
gm000999_Glyma0 -MQF-------AQKMQPLKMGFLQYIEALEEERRKIQVFPKELPLSLELVTQAIEACRQQ
gm055127_Glyma2 MYFF-------TEKMQSLKMGFPDYIQTLEEERRKIQVFSKELPLSLELVTQAIETCKQQ
                   *       ::**:  :    :*:::****::***** :****.*********:*:::

AT1G25550.1     LS--ESSEHVGGQSECSERTTSECGGAVFEEFMPIKWSSASS-----DETDKDEEAEKTE
gm028285_Glyma1 LSGTASEYNLNGHSECSEQTTST-EGPVLEEFIPIKKMA-SSSPFCDEEDEDDEQHSHKQ
gm000999_Glyma0 LAGTVAEYNLNGQSECSEQ-TST-DGPVFEEFIPLKKRASQDSV---EEEDEDEEHFHKH
gm055127_Glyma2 LSGTTSEYNLNGHSECSEQTTST-EGPVLEEFIPIKKRASSSSPCC---DEDDEQHSHKQ
                *:   :. ::.*:*****: **   *.*:***:*:*  : ..        :.**:  :..

AT1G25550.1     MMTNENNDGDKKKSDWLRSVQLWNQSPDPQPNN----KKPMVIEVKRS---AGAFQPFQK
gm028285_Glyma1 RVSKENNNSDKRKSDWLRSVQLWNPD-PPAEED--VNKKVPGLELKRSGNGGGAFQPFHK
gm000999_Glyma0 KKTA----TDKKKSDWLRSVQLWNPNPPPTKEDVVVPRKTDVVEVKRN---GGAFQPFQR
gm055127_Glyma2 RVSKENNNSDKRKSDWLRSVQLWNPD-PPAEED--VSKIVCGVELKRSGSGGGAFQPLHK
                  :      **:************ .  *  ::    :    :*:**.   .*****:::

AT1G25550.1     EKPKAADSQPLI-------KAITPTSTTTTSSTAETVGGGKEFEEQKQSHSNRKQRRCWS
gm028285_Glyma1 EERGAKTSESLS-------KAPSSTSVAAASSSAAEPAAEKSLNEG-----HRKQRRCWS
gm000999_Glyma0 EEKSGDAKASINNDASAIGKAPSSPPVPATSSTGPVRVENKKEEKGQ---AQRKQRRCWS
gm055127_Glyma2 EEKSSKPSESLS-------KTPSSTPVVATSSSAVEPAEEKSLNEG-----QRKLRRCWS
                *:  .  . .:        *: :.... ::**:.      *. ::      :** *****

AT1G25550.1     PELHRRFLHALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRLHTRRPATPVVRT
gm028285_Glyma1 QDLHKRFLHALQQLGGADTATPKQIREIMNVDGLTNDEVKSHLQKYRLHTRRP-SPMVHN
gm000999_Glyma0 QELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRR--SPIIHN
gm055127_Glyma2 QDLHKRFLHALQQLGGADSATPKQIRELMNVDGLTNDEVKSHLQKYRLHTRRP-IPMVHN
                 :**:***********:. *******::*:***************:******   *:::.

AT1G25550.1     GGENPQQRQFMVMEGIWVPS--------HDTTNNR-------------VYAPVATQPP--
gm028285_Glyma1 SS-NPQAAPFVLVGNIFVQSPEYAAVA-TSTASRE----VATVAAPAGIYAPVATHPIPV
gm000999_Glyma0 NA-SSQAGPLFLVGNIFVQPPEYAAVATTSTASGEELTTVTTTTAPTGIYAPVAAHPPAV
gm055127_Glyma2 SS-DPQAAPFVLVGNIFVQSPEYAAVA-TSTASRE----VATVAAPARIYAPVATHPTPV
                .. ..*   :.:: .*:* .         .*:. .             :*****::*   

AT1G25550.1     -------------------QSSTSGERSNRG-----CKSPATSSTTTHT-PHLLPLS-
gm028285_Glyma1 SHPPADSIKNPQFKKVQLFEHSISDERANHSEGAVHSNSP-TSSSSTHT-STSLGY--
gm000999_Glyma0 TH------TLPIMKQK---EHSHSEERPNHS---VLSNSP-ASSSSTHTITTSPPVPN
gm055127_Glyma2 SHPPDDSIKKPQFKKVKLFELSNSDDRANHSEGAVHSNSP-TSSSSTHT-STSPGY--
                                   : * * :*.*:.     .:** :**::*** .
BoxShade v3.31 C (beta, 970507) Output
AT1G25550.1     M M M F K S G D M D Y T Q K M K R C H - - - - E Y V E A L E E E Q K K I Q V F Q R E L P L C L E L V T Q A I E S C R K E
gm028285_Glyma1    M Y F F - - - - - - - T E K M H S L K M G F P D Y I Q T L E E E R R K I Q V F S K E L P L S L E L V T Q A I E A C K Q Q
gm000999_Glyma0    - M Q F - - - - - - - A Q K M Q P L K M G F L Q Y I E A L E E E R R K I Q V F P K E L P L S L E L V T Q A I E A C R Q Q
gm055127_Glyma2    M Y F F - - - - - - - T E K M Q S L K M G F P D Y I Q T L E E E R R K I Q V F S K E L P L S L E L V T Q A I E T C K Q Q
 
AT1G25550.1     L S - - E S S E H V G G Q S E C S E R T T S E C G G A V F E E F M P I K W S S A S S - - - - - D E T D K D E E A E K T E
gm028285_Glyma1    L S G T A S E Y N L N G H S E C S E Q T T S T - E G P V L E E F I P I K K M A - S S S P F C D E E D E D D E Q H S H K Q
gm000999_Glyma0    L A G T V A E Y N L N G Q S E C S E Q - T S T - D G P V F E E F I P L K K R A S Q D S V - - - E E E D E D E E H F H K H
gm055127_Glyma2    L S G T T S E Y N L N G H S E C S E Q T T S T - E G P V L E E F I P I K K R A S S S S P C C - - - D E D D E Q H S H K Q
 
AT1G25550.1     M M T N E N N D G D K K K S D W L R S V Q L W N Q S P D P Q P N N - - - - K K P M V I E V K R S - - - A G A F Q P F Q K
gm028285_Glyma1    R V S K E N N N S D K R K S D W L R S V Q L W N P D - P P A E E D - - V N K K V P G L E L K R S G N G G G A F Q P F H K
gm000999_Glyma0    K K T A - - - - T D K K K S D W L R S V Q L W N P N P P P T K E D V V V P R K T D V V E V K R N - - - G G A F Q P F Q R
gm055127_Glyma2    R V S K E N N N S D K R K S D W L R S V Q L W N P D - P P A E E D - - V S K I V C G V E L K R S G S G G G A F Q P L H K
 
AT1G25550.1     E K P K A A D S Q P L I - - - - - - - K A I T P T S T T T T S S T A E T V G G G K E F E E Q K Q S H S N R K Q R R C W S
gm028285_Glyma1    E E R G A K T S E S L S - - - - - - - K A P S S T S V A A A S S S A A E P A A E K S L N E G - - - - - H R K Q R R C W S
gm000999_Glyma0    E E K S G D A K A S I N N D A S A I G K A P S S P P V P A T S S T G P V R V E N K K E E K G Q - - - A Q R K Q R R C W S
gm055127_Glyma2    E E K S S K P S E S L S - - - - - - - K T P S S T P V V A T S S S A V E P A E E K S L N E G - - - - - Q R K L R R C W S
 
AT1G25550.1     P E L H R R F L H A L Q Q L G G S H V A T P K Q I R D L M K V D G L T N D E V K S H L Q K Y R L H T R R P A T P V V R T
gm028285_Glyma1    Q D L H K R F L H A L Q Q L G G A D T A T P K Q I R E I M N V D G L T N D E V K S H L Q K Y R L H T R R P - S P M V H N
gm000999_Glyma0    Q E L H K R F L H A L Q Q L G G A D S A T P K Q I R E L M K V D G L T N D E V K S H L Q K F R L H T R R - - S P I I H N
gm055127_Glyma2    Q D L H K R F L H A L Q Q L G G A D S A T P K Q I R E L M N V D G L T N D E V K S H L Q K Y R L H T R R P - I P M V H N
 
AT1G25550.1     G G E N P Q Q R Q F M V M E G I W V P S - - - - - - - - H D T T N N R - - - - - - - - - - - - - V Y A P V A T Q P P - -
gm028285_Glyma1    S S - N P Q A A P F V L V G N I F V Q S P E Y A A V A - T S T A S R E - - - - V A T V A A P A G I Y A P V A T H P I P V
gm000999_Glyma0    N A - S S Q A G P L F L V G N I F V Q P P E Y A A V A T T S T A S G E E L T T V T T T T A P T G I Y A P V A A H P P A V
gm055127_Glyma2    S S - D P Q A A P F V L V G N I F V Q S P E Y A A V A - T S T A S R E - - - - V A T V A A P A R I Y A P V A T H P T P V
 
AT1G25550.1     - - - - - - - - - - - - - - - - - - - Q S S T S G E R S N R G - - - - - C K S P A T S S T T T H T - P H L L P L S -
gm028285_Glyma1    S H P P A D S I K N P Q F K K V Q L F E H S I S D E R A N H S E G A V H S N S P - T S S S S T H T - S T S L G Y - -
gm000999_Glyma0    T H - - - - - - T L P I M K Q K - - - E H S H S E E R P N H S - - - V L S N S P - A S S S S T H T I T T S P P V P N
gm055127_Glyma2    S H P P D D S I K K P Q F K K V K L F E L S N S D D R A N H S E G A V H S N S P - T S S S S T H T - S T S P G Y - -
 
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