fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25560.1 VQTVVRLFGVNIFNV at 313/361 in AT1G25560.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042964 PIQMVRLFGVNIFNV in 325/369 AT1G25560.1 not_1st 0.620328849 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G25560.1     MEYSCVDDSSTTSESLSISTTPKPTTTTEKKLSSPPATSMR-----LYRMGSGGSSVVLD
pt042964_POPTR_ MDGSCVDESTTSSTDNSISITPTSLTP-----SPPPATTTKSPPESLCRVGS-GNSVILD
                *: ****:*:*:* . *** **.. *.     *.****: :     * *:** *.**:**

AT1G25560.1     SENGVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRR
pt042964_POPTR_ LELGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDTAAQR
                 * ***:****************************************:*** :** *.:*

AT1G25560.1     FRGRDAVTNFK--SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRR--KFVNGD
pt042964_POPTR_ FRGRDAVTNFKQVNETEDDEIEAAFLITHSKAEIVDMLRKHTYSDELEQSKRNQRSNNGV
                ***********  .:.:.:: *:*** :***************:**:***:*  :  ** 

AT1G25560.1     GKRSGLETATYGNDA-------VLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLP
pt042964_POPTR_ NGKQYKNTANYGSNSYDHGCGRVLKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ
                . :.  :**.**.::       **:*** ****:************************* 

AT1G25560.1     AMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGD
pt042964_POPTR_ STSSC------STKGVLLNLEDMSGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKSLKAGD
                : ::.      .*****:**** :******************************.*:***

AT1G25560.1     VVCFERSTGPDRQLYIHWKVRS-----SPVQTV--VRLFGVNIFNVSNEKPNDVAVECVG
pt042964_POPTR_ IVCFQRSTGPDKQLYIDWKARSGSNQVQPVQPIQMVRLFGVNIFNVPGMENG-----CNG
                :***:******:****.**.**     .***.:  ***********.. : .     * *

AT1G25560.1     KKRSREDDLFSLG--CSKKQAIINIL
pt042964_POPTR_ KRSVREMELLSLDHQYSKKQRIIGAL
                *:  ** :*:**.   **** **. *
BoxShade v3.31 C (beta, 970507) Output
AT1G25560.1     M E Y S C V D D S S T T S E S L S I S T T P K P T T T T E K K L S S P P A T S M R - - - - - L Y R M G S G G S S V V L D
pt042964_POPTR_    M D G S C V D E S T T S S T D N S I S I T P T S L T P - - - - - S P P P A T T T K S P P E S L C R V G S - G N S V I L D
 
AT1G25560.1     S E N G V E T E S R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E E E A A S S Y D I A V R R
pt042964_POPTR_    L E L G V E A E S R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E D E A A R A Y D T A A Q R
 
AT1G25560.1     F R G R D A V T N F K - - S Q V D G N D A E S A F L D A H S K A E I V D M L R K H T Y A D E F E Q S R R - - K F V N G D
pt042964_POPTR_    F R G R D A V T N F K Q V N E T E D D E I E A A F L I T H S K A E I V D M L R K H T Y S D E L E Q S K R N Q R S N N G V
 
AT1G25560.1     G K R S G L E T A T Y G N D A - - - - - - - V L R A R E V L F E K T V T P S D V G K L N R L V I P K Q H A E K H F P L P
pt042964_POPTR_    N G K Q Y K N T A N Y G S N S Y D H G C G R V L K A R E Q L F E K A V T P S D V G K L N R L V I P K Q H A E K H F P L Q
 
AT1G25560.1     A M T T A M G M N P S P T K G V L I N L E D R T G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L R A G D
pt042964_POPTR_    S T S S C - - - - - - S T K G V L L N L E D M S G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K S L K A G D
 
AT1G25560.1     V V C F E R S T G P D R Q L Y I H W K V R S - - - - - S P V Q T V - - V R L F G V N I F N V S N E K P N D V A V E C V G
pt042964_POPTR_    I V C F Q R S T G P D K Q L Y I D W K A R S G S N Q V Q P V Q P I Q M V R L F G V N I F N V P G M E N G - - - - - C N G
 
AT1G25560.1     K K R S R E D D L F S L G - - C S K K Q A I I N I L
pt042964_POPTR_    K R S V R E M E L L S L D H Q Y S K K Q R I I G A L
 
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