fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25560.1 VQTVVRLFGVNIFNV at 313/361 in AT1G25560.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000363 ARVVVKLFGVDIAGD in 305/317 AT1G68840.1 not_not 0.428998505 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G25560.1     ME-------YSCVDDSSTTSESLSISTTPKPTTTTEKKLSSPP---------ATSMRLYR
Os000363_Os01t0 MEQEAAMVVFSCNSGSGGSSS----TTDSKQEEEEEEELAAMEEDELIHVVQAAELRL--
                **       :** ..*. :*.    :* .*     *::*::           *:.:**  

AT1G25560.1     MGSGGSSVVLDSENGVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEE
Os000363_Os01t0 ----PSST---------TATR--PSSRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEA
                     **.         * :*  ***:******************:* ******* :** 

AT1G25560.1     AASSYDIAVRRFRGRDAVTNFKSQVDGNDA-ESAFLDAHSKAEIVDMLRKHTYADEFEQS
Os000363_Os01t0 AARAYDVAALRFRGRDAVTNRAPAAEGASAGELAFLAAHSKAEVVDMLRKHTYDDELQQG
                ** :**:*. **********  . .:* .* * *** ******:********* **::*.

AT1G25560.1     RRKFVNGDGKRSGLETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPL
Os000363_Os01t0 LRR-----GSRAQ-PTPRW-------AREPLFEKAVTPSDVGKLNRLVVPKQQAERHFPF
                 *:     *.*:   *. :       *** ****:*************:***:**:***:

AT1G25560.1     PAM---TTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL
Os000363_Os01t0 PLRRHSSDAAG------KGVLLNFEDGDGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGL
                *     : * *      ****:*:**  ***************************:**.*

AT1G25560.1     RAGDVVCFERST---GPDRQLYIHWK--------VRSSPVQTVVRLFGVNIFNVSNEKPN
Os000363_Os01t0 RPGDTVAFSRSAAAWGTEKHLLIDCKKMERNNLATVDDDARVVVKLFGVDI---------
                *.**.*.*.**:   *.:::* *. *        . .. .:.**:****:*         

AT1G25560.1     DVAVECVGKKRSREDDLFSLGCSKKQAIINIL
Os000363_Os01t0 ------AGDKTR--------------------
                      .*.*
BoxShade v3.31 C (beta, 970507) Output
AT1G25560.1     M E - - - - - - - Y S C V D D S S T T S E S L S I S T T P K P T T T T E K K L S S P P - - - - - - - - - A T S M R L Y R
Os000363_Os01t0    M E Q E A A M V V F S C N S G S G G S S S - - - - T T D S K Q E E E E E E E L A A M E E D E L I H V V Q A A E L R L - -
 
AT1G25560.1     M G S G G S S V V L D S E N G V E T E S R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E E E
Os000363_Os01t0    - - - - P S S T - - - - - - - - - T A T R - - P S S R Y K G V V P Q P N G R W G A Q I Y E R H A R V W L G T F P D E E A
 
AT1G25560.1     A A S S Y D I A V R R F R G R D A V T N F K S Q V D G N D A - E S A F L D A H S K A E I V D M L R K H T Y A D E F E Q S
Os000363_Os01t0    A A R A Y D V A A L R F R G R D A V T N R A P A A E G A S A G E L A F L A A H S K A E V V D M L R K H T Y D D E L Q Q G
 
AT1G25560.1     R R K F V N G D G K R S G L E T A T Y G N D A V L R A R E V L F E K T V T P S D V G K L N R L V I P K Q H A E K H F P L
Os000363_Os01t0    L R R - - - - - G S R A Q - P T P R W - - - - - - - A R E P L F E K A V T P S D V G K L N R L V V P K Q Q A E R H F P F
 
AT1G25560.1     P A M - - - T T A M G M N P S P T K G V L I N L E D R T G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L
Os000363_Os01t0    P L R R H S S D A A G - - - - - - K G V L L N F E D G D G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V R E K G L
 
AT1G25560.1     R A G D V V C F E R S T - - - G P D R Q L Y I H W K - - - - - - - - V R S S P V Q T V V R L F G V N I F N V S N E K P N
Os000363_Os01t0    R P G D T V A F S R S A A A W G T E K H L L I D C K K M E R N N L A T V D D D A R V V V K L F G V D I - - - - - - - - -
 
AT1G25560.1     D V A V E C V G K K R S R E D D L F S L G C S K K Q A I I N I L
Os000363_Os01t0    - - - - - - A G D K T R - - - - - - - - - - - - - - - - - - - -
 
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