fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25560.1 VQTVVRLFGVNIFNV at 313/361 in AT1G25560.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025645 not found in 538aa AT1G25560.1 not_1st 0.463378176 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G25560.1     -----------MEYSCVDDSSTTSESLSISTTPK-PTTTTEKKLSSPPATSMRLYRMGSG
Sb025645_Sorbi1 PASSSGALKMDSASSLVDDTSSGSGGGGGASTDKLRALAVAAAASGPP-----LERMGSG
                              * ***:*: * . . ::* *  : :.    *.**     * *****

AT1G25560.1     GSSVVLDSENGVETESR------------KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWL
Sb025645_Sorbi1 ASAVLDAAEPGAEADSAAAAAPGAVGVGGKLPSSRYKGVVPQPNGRWGAQIYERHQRVWL
                .*:*:  :* *.*::*             *****:******************:******

AT1G25560.1     GTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVDGND---AESAFLDAHSKAEIVDMLRK
Sb025645_Sorbi1 GTFAGEADAARAYDVAAQRFRGRDAVTNFRPLADADPDAAAELRFLASRSKAEVVDMLRK
                ***  * :** :**:*.:***********:. .*.:    **  ** ::****:******

AT1G25560.1     HTYADEFEQSRRKF-------------------VNGDGKRSGLETATYGNDAVLRAREVL
Sb025645_Sorbi1 HTYFDELAQNKRAFAAAAAAAASSAATTTASSLANNNNNHSSLASPSPAT-----AREHL
                *** **: *.:* *                   .*.:.::*.* :.: ..     *** *

AT1G25560.1     FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF
Sb025645_Sorbi1 FDKTVTPSDVGKLNRLVIPKQHAEKHFPL-QLPSAGG----ESKGVLLNLEDAAGKVWRF
                *:***************************  :.:* *     :****:**** :******

AT1G25560.1     RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERST----GPDRQLYIHWKVRSSPVQ
Sb025645_Sorbi1 RYSYWNSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRSSAVGAGADTKLFIDCKLRPNSVA
                ************************.*:***** * **:    *.* :*:*. *:*...* 

AT1G25560.1     T------------------------VVRLFGVNIFNVSNEKPNDVAVE-----CVGKKRS
Sb025645_Sorbi1 TASTTTGPAVGSSPPAPAPAPVATKAVRLFGVDLLTA----PAATAAAPAEAMAAGCKRA
                *                        .******:::..    *  .*.      ..* **:

AT1G25560.1     REDDLFS--LGCSKKQAIINIL-
Sb025645_Sorbi1 R--DLASPPQAAFKKQLVELALV
                *  ** *   .. *** :   *
BoxShade v3.31 C (beta, 970507) Output
AT1G25560.1     - - - - - - - - - - - M E Y S C V D D S S T T S E S L S I S T T P K - P T T T T E K K L S S P P A T S M R L Y R M G S G
Sb025645_Sorbi1    P A S S S G A L K M D S A S S L V D D T S S G S G G G G G A S T D K L R A L A V A A A A S G P P - - - - - L E R M G S G
 
AT1G25560.1     G S S V V L D S E N G V E T E S R - - - - - - - - - - - - K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L
Sb025645_Sorbi1    A S A V L D A A E P G A E A D S A A A A A P G A V G V G G K L P S S R Y K G V V P Q P N G R W G A Q I Y E R H Q R V W L
 
AT1G25560.1     G T F N E E E E A A S S Y D I A V R R F R G R D A V T N F K S Q V D G N D - - - A E S A F L D A H S K A E I V D M L R K
Sb025645_Sorbi1    G T F A G E A D A A R A Y D V A A Q R F R G R D A V T N F R P L A D A D P D A A A E L R F L A S R S K A E V V D M L R K
 
AT1G25560.1     H T Y A D E F E Q S R R K F - - - - - - - - - - - - - - - - - - - V N G D G K R S G L E T A T Y G N D A V L R A R E V L
Sb025645_Sorbi1    H T Y F D E L A Q N K R A F A A A A A A A A S S A A T T T A S S L A N N N N N H S S L A S P S P A T - - - - - A R E H L
 
AT1G25560.1     F E K T V T P S D V G K L N R L V I P K Q H A E K H F P L P A M T T A M G M N P S P T K G V L I N L E D R T G K V W R F
Sb025645_Sorbi1    F D K T V T P S D V G K L N R L V I P K Q H A E K H F P L - Q L P S A G G - - - - E S K G V L L N L E D A A G K V W R F
 
AT1G25560.1     R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L R A G D V V C F E R S T - - - - G P D R Q L Y I H W K V R S S P V Q
Sb025645_Sorbi1    R Y S Y W N S S Q S Y V L T K G W S R F V K E K G L Q A G D V V G F Y R S S A V G A G A D T K L F I D C K L R P N S V A
 
AT1G25560.1     T - - - - - - - - - - - - - - - - - - - - - - - - V V R L F G V N I F N V S N E K P N D V A V E - - - - - C V G K K R S
Sb025645_Sorbi1    T A S T T T G P A V G S S P P A P A P A P V A T K A V R L F G V D L L T A - - - - P A A T A A A P A E A M A A G C K R A
 
AT1G25560.1     R E D D L F S - - L G C S K K Q A I I N I L -
Sb025645_Sorbi1    R - - D L A S P P Q A A F K K Q L V E L A L V
 
0