fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25560.1 VQTVVRLFGVNIFNV at 313/361 in AT1G25560.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024795 EARVVRLFGVDIAGD in 418/557 AT1G68840.1 not_not 0.430493273 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G25560.1     ------------------------------------------------MEYSC--VDDSS
Sb024795_Sorbi1 RRILSITGRRAAAGSRVPKQKSKKPKAARLQGAARAVALAHLIMGIESMSPTAAPAEDSS
                                                                *. :.  .:***

AT1G25560.1     TTSESLSISTTPKPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSENGVETE----SRK
Sb024795_Sorbi1 SSSSRFSAAS----TATTESGAAQPRAAS-----AAPGGGAVVVGRDASLADEQAVTSQP
                ::*. :* ::    *:***.  :.* *:*      ..**.:**:. : .:  *    *: 

AT1G25560.1     LP----------SSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRF
Sb024795_Sorbi1 LAASTAAAVAQGSSRFKGVVPQPNGRWGAQIYERHARVWLGTFADEEAAARAYDVAALRY
                *.          **::*****************:* ******* :** ** :**:*. *:

AT1G25560.1     RGRDAVTNFKSQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGDGKRSG
Sb024795_Sorbi1 RGREAATNFPG-AGASAPELTFLAAHSKAEIVDMLRKHTYADELRQGLRRG-RGMGARAQ
                ***:*.*** . .... .* :** *******************:.*. *:  .* * *: 

AT1G25560.1     LETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSP
Sb024795_Sorbi1 PTPAW--------ARSLLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLKRAPEASAAAATT
                  .*         **.:****:*************:***********   . * .  .:.

AT1G25560.1     TKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERST-GPD
Sb024795_Sorbi1 GKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSHSTYSSE
                 ****:*:**  ***************************:**.*****.: *.:** ..:

AT1G25560.1     RQLYIHW-KVRSSPVQT------------------VVRLFGVNIFNVSNEK---PNDVAV
Sb024795_Sorbi1 KQLFIDCKKTKTTTVATTDGAPVPAPAEKKPSEARVVRLFGVDIAGDGCQKRARPVEIAF
                :**:*.  *.:::.* *                  *******:* . . :*   * ::*.

AT1G25560.1     E------------CVGKKRSREDDL--FSLGCSKKQAIINIL
Sb024795_Sorbi1 EHGPQQELLKKKQCVGVAHHRSPALGAFLL------------
                *            ***  : *.  *  * *
BoxShade v3.31 C (beta, 970507) Output
AT1G25560.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E Y S C - - V D D S S
Sb024795_Sorbi1    R R I L S I T G R R A A A G S R V P K Q K S K K P K A A R L Q G A A R A V A L A H L I M G I E S M S P T A A P A E D S S
 
AT1G25560.1     T T S E S L S I S T T P K P T T T T E K K L S S P P A T S M R L Y R M G S G G S S V V L D S E N G V E T E - - - - S R K
Sb024795_Sorbi1    S S S S R F S A A S - - - - T A T T E S G A A Q P R A A S - - - - - A A P G G G A V V V G R D A S L A D E Q A V T S Q P
 
AT1G25560.1     L P - - - - - - - - - - S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E E E A A S S Y D I A V R R F
Sb024795_Sorbi1    L A A S T A A A V A Q G S S R F K G V V P Q P N G R W G A Q I Y E R H A R V W L G T F A D E E A A A R A Y D V A A L R Y
 
AT1G25560.1     R G R D A V T N F K S Q V D G N D A E S A F L D A H S K A E I V D M L R K H T Y A D E F E Q S R R K F V N G D G K R S G
Sb024795_Sorbi1    R G R E A A T N F P G - A G A S A P E L T F L A A H S K A E I V D M L R K H T Y A D E L R Q G L R R G - R G M G A R A Q
 
AT1G25560.1     L E T A T Y G N D A V L R A R E V L F E K T V T P S D V G K L N R L V I P K Q H A E K H F P L P A M T T A M G M N P S P
Sb024795_Sorbi1    P T P A W - - - - - - - - A R S L L F E K A V T P S D V G K L N R L V V P K Q H A E K H F P L K R A P E A S A A A A T T
 
AT1G25560.1     T K G V L I N L E D R T G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L R A G D V V C F E R S T - G P D
Sb024795_Sorbi1    G K G V L L N F E D G E G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V R E K G L R A G D T I V F S H S T Y S S E
 
AT1G25560.1     R Q L Y I H W - K V R S S P V Q T - - - - - - - - - - - - - - - - - - V V R L F G V N I F N V S N E K - - - P N D V A V
Sb024795_Sorbi1    K Q L F I D C K K T K T T T V A T T D G A P V P A P A E K K P S E A R V V R L F G V D I A G D G C Q K R A R P V E I A F
 
AT1G25560.1     E - - - - - - - - - - - - C V G K K R S R E D D L - - F S L G C S K K Q A I I N I L
Sb024795_Sorbi1    E H G P Q Q E L L K K K Q C V G V A H H R S P A L G A F L L - - - - - - - - - - - -
 
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