fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G25560.1 VQTVVRLFGVNIFNV at 313/361 in AT1G25560.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032995 PVKAVRLFGVDLLTT in 374/428 AT1G25560.1 1st_1st 0.475336322 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G25560.1     ---MEY--------------------SC-VDDSSTTSESLSISTTPKPTTTTEKKLSSPP
Sb032995_Sorbi1 PPLLELNLPQSISLSRGGCSDRMDSTSCLLDDASSGASTGNKNPAPAPAAATGGK----P
                   :*                     ** :**:*: :.: . ..:* *:::*  *    *

AT1G25560.1     ATSMRLYRMGSGGSSVVLDSENGVETES------------------RKLPSSKYKGVVPQ
Sb032995_Sorbi1 -----LQRVGSGASAVMDAAEPGAEADSGSGGAGRATGGCGVVSGNGKLPSSKYKGVVPQ
                     * *:***.*:*:  :* *.*::*                   *************

AT1G25560.1     PNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFKSQVDGNDAESA-
Sb032995_Sorbi1 PNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLAE-SDPEAAV
                ***********:*********. * *** :**:*.:***********:. .: .*.*:* 

AT1G25560.1     ---FLDAHSKAEIVDMLRKHTYADEFEQSRRKFVNGD------GKRSGLETATYGNDAVL
Sb032995_Sorbi1 ELRFLASRTKAEVVDMLRKHTYGEELAQNRRAFAAASPAASPPPAKNNNPAASSSSPTAV
                   ** :::***:*********.:*: *.** *. ..        :..  :*: .. :.:

AT1G25560.1     RAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRT
Sb032995_Sorbi1 TAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPAAAAAVVGGECKGVLLNFEDAT
                 *** **:***************************   ::* .:  .  ****:*:** *

AT1G25560.1     GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVR---
Sb032995_Sorbi1 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAGGKQQFFIDCKLRPKT
                ******************************.*:***.* * **:* .:*::*. *:*   

AT1G25560.1     ----------------SSPVQTVVRLFGVNIFNVSNEKPNDVAVE-----CVGKKRSRED
Sb032995_Sorbi1 TTTAASFVNATTTTAAPSPVKA-VRLFGVDLLTTPRPGPAVVAAPEQEEIAMANKRARD-
                                .***:: ******:::....  *  **.      .:.:**:*: 

AT1G25560.1     DLFSLGCSKKQAIINIL--------------
Sb032995_Sorbi1 -----------AIARVLQYTWFSRSNAYTSR
                           ** .:*
BoxShade v3.31 C (beta, 970507) Output
AT1G25560.1     - - - M E Y - - - - - - - - - - - - - - - - - - - - S C - V D D S S T T S E S L S I S T T P K P T T T T E K K L S S P P
Sb032995_Sorbi1    P P L L E L N L P Q S I S L S R G G C S D R M D S T S C L L D D A S S G A S T G N K N P A P A P A A A T G G K - - - - P
 
AT1G25560.1     A T S M R L Y R M G S G G S S V V L D S E N G V E T E S - - - - - - - - - - - - - - - - - - R K L P S S K Y K G V V P Q
Sb032995_Sorbi1    - - - - - L Q R V G S G A S A V M D A A E P G A E A D S G S G G A G R A T G G C G V V S G N G K L P S S K Y K G V V P Q
 
AT1G25560.1     P N G R W G A Q I Y E K H Q R V W L G T F N E E E E A A S S Y D I A V R R F R G R D A V T N F K S Q V D G N D A E S A -
Sb032995_Sorbi1    P N G R W G A Q I Y E R H Q R V W L G T F T G E A E A A R A Y D V A A Q R F R G R D A V T N F R P L A E - S D P E A A V
 
AT1G25560.1     - - - F L D A H S K A E I V D M L R K H T Y A D E F E Q S R R K F V N G D - - - - - - G K R S G L E T A T Y G N D A V L
Sb032995_Sorbi1    E L R F L A S R T K A E V V D M L R K H T Y G E E L A Q N R R A F A A A S P A A S P P P A K N N N P A A S S S S P T A V
 
AT1G25560.1     R A R E V L F E K T V T P S D V G K L N R L V I P K Q H A E K H F P L P A M T T A M G M N P S P T K G V L I N L E D R T
Sb032995_Sorbi1    T A R E H L F D K T V T P S D V G K L N R L V I P K Q H A E K H F P L Q L P A A A A A V V G G E C K G V L L N F E D A T
 
AT1G25560.1     G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L R A G D V V C F E R S T G P D R Q L Y I H W K V R - - -
Sb032995_Sorbi1    G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K G L H A G D A V G F Y R S A G G K Q Q F F I D C K L R P K T
 
AT1G25560.1     - - - - - - - - - - - - - - - - S S P V Q T V V R L F G V N I F N V S N E K P N D V A V E - - - - - C V G K K R S R E D
Sb032995_Sorbi1    T T T A A S F V N A T T T T A A P S P V K A - V R L F G V D L L T T P R P G P A V V A A P E Q E E I A M A N K R A R D -
 
AT1G25560.1     D L F S L G C S K K Q A I I N I L - - - - - - - - - - - - - -
Sb032995_Sorbi1    - - - - - - - - - - - A I A R V L Q Y T W F S R S N A Y T S R
 
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