fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26310.1 AMRRNNLDLTLEPIYN at 237/255 in AT1G26310.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042631 ARRNYELDLTLEPIYS in 223/241 AT1G69120.1 1st_not 0.589041095 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G26310.1     MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE
pt042631_POPTR_ MGRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTN
                ******:*************************:**********:**************::

AT1G26310.1     SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE
pt042631_POPTR_ ACMEKILERHERYSYAERQLVATD--LDSQGNWTLEYNRLKAKVELLQRNHRHYLGEDLD
                :****:***:**********:*.*  :::* **::**.*****:***:**:******:*:

AT1G26310.1     PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI
pt042631_POPTR_ SVSLKELQNLEQQIDTALKLIRERKNHLMYQSISELQIKEKAIKEQNNMLVKQIKEKEKA
                .:***:*******::**** **.***:** :*:..** *** *:*:*.**.*****:*: 

AT1G26310.1     LRTKQTQCEQLNRSVDDVPQPQPFQHPHLYMIAHQTSPFLNMGGLYQEEDQTAMRRNNLD
pt042631_POPTR_ LAQPALWDQQ-----DHGPNASSFLLPQLPL------PCLNIS--YQEEDPEARRNYELD
                *       :*     *. *:...*  *:* :      * **:.  *****  * *. :**

AT1G26310.1     LTLEPIYN-YLGCYAA
pt042631_POPTR_ LTLEPIYSCHLGCFGT
                *******. :***:.:
BoxShade v3.31 C (beta, 970507) Output
AT1G26310.1     M G R G R V E L K R I E N K I N R Q V T F S K R R T G L L K K A Q E I S V L C D A E V S L I V F S H K G K L F E Y S S E
pt042631_POPTR_    M G R G R V Q L K R I E N K I N R Q V T F S K R R T G L L K K A H E I S V L C D A E V A L I V F S H K G K L F E Y S T N
 
AT1G26310.1     S C M E K V L E R Y E R Y S Y A E R Q L I A P D S H V N A Q T N W S M E Y S R L K A K I E L L E R N Q R H Y L G E E L E
pt042631_POPTR_    A C M E K I L E R H E R Y S Y A E R Q L V A T D - - L D S Q G N W T L E Y N R L K A K V E L L Q R N H R H Y L G E D L D
 
AT1G26310.1     P M S L K D L Q N L E Q Q L E T A L K H I R S R K N Q L M N E S L N H L Q R K E K E I Q E E N S M L T K Q I K E R E N I
pt042631_POPTR_    S V S L K E L Q N L E Q Q I D T A L K L I R E R K N H L M Y Q S I S E L Q I K E K A I K E Q N N M L V K Q I K E K E K A
 
AT1G26310.1     L R T K Q T Q C E Q L N R S V D D V P Q P Q P F Q H P H L Y M I A H Q T S P F L N M G G L Y Q E E D Q T A M R R N N L D
pt042631_POPTR_    L A Q P A L W D Q Q - - - - - D H G P N A S S F L L P Q L P L - - - - - - P C L N I S - - Y Q E E D P E A R R N Y E L D
 
AT1G26310.1     L T L E P I Y N - Y L G C Y A A
pt042631_POPTR_    L T L E P I Y S C H L G C F G T
 
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