fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26310.1 AMRRNNLDLTLEPIYN at 237/255 in AT1G26310.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034808 not found in 248aa AT1G69120.1 not_not 0.583170254 III
Pt004784 not found in 255aa AT1G69120.1 not_not 0.463796477 III
Pt023710 not found in 148aa AT5G60910.1 not_not 0.440313111 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G26310.1     MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE
pt034808_POPTR_ MGRGRVQLKRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIVFSHKGKLFEYSTD
pt004784_POPTR_ MGRGRVQLKRIENNISRQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTD
pt023710_POPTR_ MGRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATD
                *****::******:*.*********:******:********:*::**** *******:::

AT1G26310.1     SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE
pt034808_POPTR_ DSMEKILERYERYSYAERQLVAT--DLDSQGNWTLEYNRLKAKVELLQRNHRNYLGEDLD
pt004784_POPTR_ SSMESILERYERCSYAEQQFVPH--GPEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLD
pt023710_POPTR_ SCMERILERYERYSYAERQLLAND-DPENHGSWTLEYAKLKARVDVLQRNQRHFMGEDLD
                ..** :****** ****:*::.     : : .* :*: :*:*::::*:** *:: *::*:

AT1G26310.1     PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERE-N
pt034808_POPTR_ SMSLKELQNLEQQIDTALKHIRARKNHLMSQSISELQRKEKAIQVQNNMLVKQIKEKEKN
pt004784_POPTR_ PLSYKELQHLEQKIDTALKSVRSRKNQLVHESLAEMQKKEKALQDQNNILVEQVKKKL--
pt023710_POPTR_ SLNIKELQNLEHQIDSALKHVRSRKNQLI-------------------------------
                .:. *:**:**:::::*** :*:***:*:                               

AT1G26310.1     ILRTKQTQCEQLNRSVDDVPQPQPFQHP---HLYMIAHQTSPFLNMGGLYQ---------
pt034808_POPTR_ DKALAQPAFWDLQ---DHGPNASSFL------LSQPAGLPLPCLNIGGSHQ---------
pt004784_POPTR_ -KALTEQAQWEQQ---NLGQNSSSFMLPQAQPPLQPSMLSHPPPTIGGSFQIRGFLNGNK
pt023710_POPTR_ ------------------------------------------------------------
                                                                            

AT1G26310.1     ----EEDQTAMRRNNLDLTLEPIYNY-LGCYAA
pt034808_POPTR_ ----EEAPEA-RRNELGHTLEPIYSFHLGGYGA
pt004784_POPTR_ DVEVQTQPSTMPHWMLRHVNDRI----------
pt023710_POPTR_ ---------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G26310.1     M G R G R V E L K R I E N K I N R Q V T F S K R R T G L L K K A Q E I S V L C D A E V S L I V F S H K G K L F E Y S S E
pt034808_POPTR_    M G R G R V Q L K R I E N K I N R Q V T F S K R R T G L L K K A N E I S V L C D A E V A L I V F S H K G K L F E Y S T D
pt004784_POPTR_    M G R G R V Q L K R I E N N I S R Q V T F S K R R T G L L K K A H E I S V L C D A D V A V I V F S T K G K L F E Y S T D
pt023710_POPTR_    M G R G R I Q L K R I E N K I N R Q V T F S K R R S G L L K K A H E I S V L C D A E V A L I V F S T K G K L F E Y A T D
 
AT1G26310.1     S C M E K V L E R Y E R Y S Y A E R Q L I A P D S H V N A Q T N W S M E Y S R L K A K I E L L E R N Q R H Y L G E E L E
pt034808_POPTR_    D S M E K I L E R Y E R Y S Y A E R Q L V A T - - D L D S Q G N W T L E Y N R L K A K V E L L Q R N H R N Y L G E D L D
pt004784_POPTR_    S S M E S I L E R Y E R C S Y A E Q Q F V P H - - G P E H Q G S W F L E H P K L R A R V E L L Q R N L R N Y T G Q D L D
pt023710_POPTR_    S C M E R I L E R Y E R Y S Y A E R Q L L A N D - D P E N H G S W T L E Y A K L K A R V D V L Q R N Q R H F M G E D L D
 
AT1G26310.1     P M S L K D L Q N L E Q Q L E T A L K H I R S R K N Q L M N E S L N H L Q R K E K E I Q E E N S M L T K Q I K E R E - N
pt034808_POPTR_    S M S L K E L Q N L E Q Q I D T A L K H I R A R K N H L M S Q S I S E L Q R K E K A I Q V Q N N M L V K Q I K E K E K N
pt004784_POPTR_    P L S Y K E L Q H L E Q K I D T A L K S V R S R K N Q L V H E S L A E M Q K K E K A L Q D Q N N I L V E Q V K K K L - -
pt023710_POPTR_    S L N I K E L Q N L E H Q I D S A L K H V R S R K N Q L I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G26310.1     I L R T K Q T Q C E Q L N R S V D D V P Q P Q P F Q H P - - - H L Y M I A H Q T S P F L N M G G L Y Q - - - - - - - - -
pt034808_POPTR_    D K A L A Q P A F W D L Q - - - D H G P N A S S F L - - - - - - L S Q P A G L P L P C L N I G G S H Q - - - - - - - - -
pt004784_POPTR_    - K A L T E Q A Q W E Q Q - - - N L G Q N S S S F M L P Q A Q P P L Q P S M L S H P P P T I G G S F Q I R G F L N G N K
pt023710_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G26310.1     - - - - E E D Q T A M R R N N L D L T L E P I Y N Y - L G C Y A A
pt034808_POPTR_    - - - - E E A P E A - R R N E L G H T L E P I Y S F H L G G Y G A
pt004784_POPTR_    D V E V Q T Q P S T M P H W M L R H V N D R I - - - - - - - - - -
pt023710_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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