fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26310.1 AMRRNNLDLTLEPIYN at 237/255 in AT1G26310.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020213 not found in 285aa AT1G69120.1 1st_not 0.485322896 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G26310.1     MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE
Sb020213_Sorbi1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIIFSTKGKLYEYSTD
                ****:*:******************:******:**********:**:** ****:***::

AT1G26310.1     SCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELE
Sb020213_Sorbi1 SCMDKILERYERYSYAEKVLISAESE--TQGNWCHEYRKLKAKVETIQKCQKHLMGEDLE
                ***:*:***********: **:.:*.  :* **. ** :****:* ::: *:* :**:**

AT1G26310.1     PMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENI
Sb020213_Sorbi1 TLNLKELQQLEQQLESSLKHIRTRKSQLMLESISELQRKEKSLQEENKVLQKELAEKQ--
                .:.**:**:******::*****:**.*** **:..******.:****.:* *:: *::  

AT1G26310.1     LRTKQTQCEQLNRSVDDVPQPQPFQHPHLYMIAHQTSPFLNM-------GGLYQEEDQTA
Sb020213_Sorbi1 ----KAQRQQVQR---DQTQQQTSSSSSSFMI-REAAPTTNISIFPVAAGGRVVE---AA
                    ::* :*::*   * .* *. . .  :** ::::*  *:       **   *   :*

AT1G26310.1     MRRNNLDLTLEP-IYNYLGCYAA
Sb020213_Sorbi1 AAPPQARVGLPPWMLSHLSG---
                    :  : * * : .:*.
BoxShade v3.31 C (beta, 970507) Output
AT1G26310.1     M G R G R V E L K R I E N K I N R Q V T F S K R R T G L L K K A Q E I S V L C D A E V S L I V F S H K G K L F E Y S S E
Sb020213_Sorbi1    M G R G K V Q L K R I E N K I N R Q V T F S K R R S G L L K K A H E I S V L C D A E V A L I I F S T K G K L Y E Y S T D
 
AT1G26310.1     S C M E K V L E R Y E R Y S Y A E R Q L I A P D S H V N A Q T N W S M E Y S R L K A K I E L L E R N Q R H Y L G E E L E
Sb020213_Sorbi1    S C M D K I L E R Y E R Y S Y A E K V L I S A E S E - - T Q G N W C H E Y R K L K A K V E T I Q K C Q K H L M G E D L E
 
AT1G26310.1     P M S L K D L Q N L E Q Q L E T A L K H I R S R K N Q L M N E S L N H L Q R K E K E I Q E E N S M L T K Q I K E R E N I
Sb020213_Sorbi1    T L N L K E L Q Q L E Q Q L E S S L K H I R T R K S Q L M L E S I S E L Q R K E K S L Q E E N K V L Q K E L A E K Q - -
 
AT1G26310.1     L R T K Q T Q C E Q L N R S V D D V P Q P Q P F Q H P H L Y M I A H Q T S P F L N M - - - - - - - G G L Y Q E E D Q T A
Sb020213_Sorbi1    - - - - K A Q R Q Q V Q R - - - D Q T Q Q Q T S S S S S S F M I - R E A A P T T N I S I F P V A A G G R V V E - - - A A
 
AT1G26310.1     M R R N N L D L T L E P - I Y N Y L G C Y A A
Sb020213_Sorbi1    A A P P Q A R V G L P P W M L S H L S G - - -
 
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