fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G26310.1 AMRRNNLDLTLEPIYN at 237/255 in AT1G26310.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022566 not found in 426aa AT1G69120.1 not_not 0.461839530 III
Sb024088 not found in 443aa AT1G69120.1 not_not 0.442270058 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G26310.1     ---------------------------------------------MGRGRVELKRIENKI
Sb024088_Sorbi1 SFLPR-LPPPTRP-----HRHCCAESERERVGVEA--------AEMGRGPVQLRRIENKI
Sb022566_Sorbi1 --LPTYLPPRRRPLAASRHRRRIDRSERKELASAASAHQQADRSKMGRGKVQLKRIENKI
                                                             **** *:*:******

AT1G26310.1     NRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSY
Sb024088_Sorbi1 NRQVTFSKRRNGLLKKAHEISVLCDAEVALIVFSTKGKLYEYSSHSSMEGILERYQRYSF
Sb022566_Sorbi1 NRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYATDSRMDKILERYERYSY
                **********.******:**********::**** ****:**::.* *: :****:***:

AT1G26310.1     AERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLE
Sb024088_Sorbi1 EERAVLDPTIE--DQANWGDEYVRLKSKLDALQKSQRQLLGEQLDSLTIKELQQLEQQLD
Sb022566_Sorbi1 AEKALISAESE--SEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNPKELQQLEQQLE
                 *: :: .  .   : **  ** :**:*:: ::: ::: :**:*:.:. *:**:*****:

AT1G26310.1     TALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQI-KERENIL-----------RT
Sb024088_Sorbi1 SSLKHIRSRKNQLMFDSISELQKKEKALTDQNGVLQKLMEAEKEKNNALMNAHL----RE
Sb022566_Sorbi1 SSLKHIRSRKSHLMAESISELQKKERSLQEENKALQKEL-AERQKAAASRQQQQVQWDQQ
                ::********.:** :*:..**:**: : ::*  * * :  *:::             : 

AT1G26310.1     KQTQCEQLNRSVD--------DVPQPQPFQHPHLYMI------------AHQTSPFLNMG
Sb024088_Sorbi1 QPNGASTSSPSLS----------PPVVPDSMPTLNIGPCQPRG------AGKSEP-----
Sb022566_Sorbi1 TQTQAQTSSSSSSFMMRQDQQGLPPPQNICFPPLIIG---ERGEEVAAAAQQQQP-----
                  . ..  . * .          *       * * :             * : .*     

AT1G26310.1     GLYQEEDQTAMRRNNL-DLTLEPIYNYLGCYAA
Sb024088_Sorbi1 GPSPAPAQAN--SGNLPPWMLRTVSNR------
Sb022566_Sorbi1 PPGQAQQQAQLRIAGLPPWMLSHLNA-------
                       *:     .*    *  :
BoxShade v3.31 C (beta, 970507) Output
AT1G26310.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R G R V E L K R I E N K I
Sb024088_Sorbi1    S F L P R - L P P P T R P - - - - - H R H C C A E S E R E R V G V E A - - - - - - - - A E M G R G P V Q L R R I E N K I
Sb022566_Sorbi1    - - L P T Y L P P R R R P L A A S R H R R R I D R S E R K E L A S A A S A H Q Q A D R S K M G R G K V Q L K R I E N K I
 
AT1G26310.1     N R Q V T F S K R R T G L L K K A Q E I S V L C D A E V S L I V F S H K G K L F E Y S S E S C M E K V L E R Y E R Y S Y
Sb024088_Sorbi1    N R Q V T F S K R R N G L L K K A H E I S V L C D A E V A L I V F S T K G K L Y E Y S S H S S M E G I L E R Y Q R Y S F
Sb022566_Sorbi1    N R Q V T F S K R R N G L L K K A H E I S V L C D A E V A V I V F S P K G K L Y E Y A T D S R M D K I L E R Y E R Y S Y
 
AT1G26310.1     A E R Q L I A P D S H V N A Q T N W S M E Y S R L K A K I E L L E R N Q R H Y L G E E L E P M S L K D L Q N L E Q Q L E
Sb024088_Sorbi1    E E R A V L D P T I E - - D Q A N W G D E Y V R L K S K L D A L Q K S Q R Q L L G E Q L D S L T I K E L Q Q L E Q Q L D
Sb022566_Sorbi1    A E K A L I S A E S E - - S E G N W C H E Y R K L K A K I E T I Q K C H K H L M G E D L E S L N P K E L Q Q L E Q Q L E
 
AT1G26310.1     T A L K H I R S R K N Q L M N E S L N H L Q R K E K E I Q E E N S M L T K Q I - K E R E N I L - - - - - - - - - - - R T
Sb024088_Sorbi1    S S L K H I R S R K N Q L M F D S I S E L Q K K E K A L T D Q N G V L Q K L M E A E K E K N N A L M N A H L - - - - R E
Sb022566_Sorbi1    S S L K H I R S R K S H L M A E S I S E L Q K K E R S L Q E E N K A L Q K E L - A E R Q K A A A S R Q Q Q Q V Q W D Q Q
 
AT1G26310.1     K Q T Q C E Q L N R S V D - - - - - - - - D V P Q P Q P F Q H P H L Y M I - - - - - - - - - - - - A H Q T S P F L N M G
Sb024088_Sorbi1    Q P N G A S T S S P S L S - - - - - - - - - - P P V V P D S M P T L N I G P C Q P R G - - - - - - A G K S E P - - - - -
Sb022566_Sorbi1    T Q T Q A Q T S S S S S S F M M R Q D Q Q G L P P P Q N I C F P P L I I G - - - E R G E E V A A A A Q Q Q Q P - - - - -
 
AT1G26310.1     G L Y Q E E D Q T A M R R N N L - D L T L E P I Y N Y L G C Y A A
Sb024088_Sorbi1    G P S P A P A Q A N - - S G N L P P W M L R T V S N R - - - - - -
Sb022566_Sorbi1    P P G Q A Q Q Q A Q L R I A G L P P W M L S H L N A - - - - - - -
 
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